RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 STXBP5LQ9Y2K9 1186 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 KRIT1O00522 736 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 AKAP3O75969 853 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 STK10O94804 968 aaKnown RBP11.21□□□□□ -0.61
ERBB3-214ENST00000550070 PRKCIP41743 596 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 EPHA7Q15375 998 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.61
ERBB3-214ENST00000550070 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
ERBB3-214ENST00000550070 GJB7Q6PEY0 223 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 MICALCLQ6ZW33 695 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 SFR1Q86XK3 245 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 LRRC45Q96CN5 670 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 ARPC5LQ9BPX5 153 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
ERBB3-214ENST00000550070 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 SIX2Q9NPC8 291 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 AMACRQ9UHK6 382 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 SLC12A6Q9UHW9 1150 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.61
ERBB3-214ENST00000550070 MEIS1O00470 390 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 DAPK3O43293 454 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 SLURP2P0DP57 97 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 TMOD1P28289 359 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 APLP1P51693 650 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 IFT88Q13099 833 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 DCAF17Q5H9S7 520 aaPredicted RBP11.21□□□□□ -0.62
ERBB3-214ENST00000550070 RNF187Q5TA31 235 aaPredicted RBP11.21□□□□□ -0.62
ERBB3-214ENST00000550070 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 EPM2AIP1Q7L775 607 aaPredicted RBP11.21□□□□□ -0.62
ERBB3-214ENST00000550070 PEX26Q7Z412 305 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 SLFN11Q7Z7L1 901 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 SLF2Q8IX21 1173 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 RASGEF1CQ8N431 466 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 REEP2Q9BRK0 252 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 MAF1Q9H063 256 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 METTL14Q9HCE5 456 aaKnown RBP11.21□□□□□ -0.62
ERBB3-214ENST00000550070 CNOT8Q9UFF9 292 aaKnown RBP11.21□□□□□ -0.62
ERBB3-214ENST00000550070 SWAP70Q9UH65 585 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 GGA1Q9UJY5 639 aa11.21□□□□□ -0.62
ERBB3-214ENST00000550070 SRRM3A6NNA2 597 aaPredicted RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 H0YHG0 523 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 DDX3XO00571 662 aaKnown RBP eCLIP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 XRCC5P13010 732 aaKnown RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 ATP2B4P23634 1241 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 CASP4P49662 377 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 MNAT1P51948 309 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 SPIRE1Q08AE8 756 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 BIRC2Q13490 618 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 ARFGAP2Q8N6H7 521 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 CNBD1Q8NA66 436 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 UBLCP1Q8WVY7 318 aaPredicted RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 CYFIP2Q96F07 1278 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 CELF4Q9BZC1 486 aaKnown RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 LRRC4CQ9HCJ2 640 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 KLHL42Q9P2K6 505 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 POLLQ9UGP5 575 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 TTI1O43156 1089 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 FLOT1O75955 427 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 SPATA31C1P0DKV0 1188 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 CD151P48509 253 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 JAM2P57087 298 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 KCNA1Q09470 495 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 NT5DC3Q86UY8 548 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 P2RX7Q99572 595 aaKnown RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 IRF2BPLQ9H1B7 796 aa11.2□□□□□ -0.62
ERBB3-214ENST00000550070 SUCLA2Q9P2R7 463 aaPredicted RBP11.2□□□□□ -0.62
ERBB3-214ENST00000550070 CYP3A7-CYP3A51PA0A087WV96 503 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 RSPH10B2B2RC85 870 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 CCDC188H7C350 402 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 PDXKO00764 312 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 H2AFZP0C0S5 128 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 RSPH10BP0C881 870 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 CYP3A7P24462 503 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 SHMT1P34896 483 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 QPCTQ16769 361 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 H2AFVQ71UI9 128 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 DAAM2Q86T65 1068 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 SYT2Q8N9I0 419 aaPredicted RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 CABS1Q96KC9 395 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 NAP1L4Q99733 375 aaKnown RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 GGA2Q9UJY4 613 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 CCNL1Q9UK58 526 aaPredicted RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 F8W031 263 aaPredicted RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 CLIC2O15247 247 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 TRAPPC3O43617 180 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 FAM200BP0CF97 657 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 GTF2IP78347 998 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 BIRC3Q13489 604 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms