RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 PNMA8AQ86V59 439 aaPredicted RBP17.6■□□□□ 0.41
CUX1-213ENST00000549414 REXO1L1PQ8IX06 675 aa17.6■□□□□ 0.41
CUX1-213ENST00000549414 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
CUX1-213ENST00000549414 PASKQ96RG2 1323 aa17.6■□□□□ 0.41
CUX1-213ENST00000549414 ANO9A1A5B4 782 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 PSMD14O00487 310 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 PLEKP08567 350 aaPredicted RBP17.59■□□□□ 0.41
CUX1-213ENST00000549414 ATF2P15336 505 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 LIG3P49916 1009 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 DYNLT1P63172 113 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 ARMC9Q7Z3E5 817 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 PBKQ96KB5 322 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 MSTO1Q9BUK6 570 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 RNF14Q9UBS8 474 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
CUX1-213ENST00000549414 SYNJ2BP-COX16A0A087WUM0 186 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
CUX1-213ENST00000549414 SLC9A1P19634 815 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 BFSP1Q12934 665 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 GRB10Q13322 594 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 KIF22Q14807 665 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 LMBRD2Q68DH5 695 aaPredicted RBP17.59■□□□□ 0.41
CUX1-213ENST00000549414 COX16Q9P0S2 106 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 HHATQ5VTY9 493 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 SPOUT1Q5T280 376 aaKnown RBP17.59■□□□□ 0.41
CUX1-213ENST00000549414 RPAP3Q9H6T3 665 aaPredicted RBP17.59■□□□□ 0.41
CUX1-213ENST00000549414 TBC1D22BQ9NU19 505 aa17.59■□□□□ 0.41
CUX1-213ENST00000549414 EMSYQ7Z589 1322 aa17.58■□□□□ 0.41
CUX1-213ENST00000549414 P4HA1P13674 534 aa17.58■□□□□ 0.41
CUX1-213ENST00000549414 STX2P32856 288 aa17.58■□□□□ 0.41
CUX1-213ENST00000549414 NNTQ13423 1086 aa17.58■□□□□ 0.41
CUX1-213ENST00000549414 MS4A14Q96JA4 679 aa17.58■□□□□ 0.41
CUX1-213ENST00000549414 A6NNZ2 444 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 YWHAEP62258 255 aaKnown RBP17.58■□□□□ 0.4
CUX1-213ENST00000549414 EZH2Q15910 746 aaKnown RBP17.58■□□□□ 0.4
CUX1-213ENST00000549414 TUBB8Q3ZCM7 444 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 C10orf76Q5T2E6 689 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 SPON1Q9HCB6 807 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 PLCB1Q9NQ66 1216 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 SNX24Q9Y343 169 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 VAMP7P51809 220 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 AGBL1Q96MI9 1066 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.4
CUX1-213ENST00000549414 CYTH3O43739 400 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 ERVK-24P63145 666 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 SLC17A8Q8NDX2 589 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 INTS2Q9H0H0 1204 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 GOLPH3Q9H4A6 298 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 ITIH6Q6UXX5 1313 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 RNF8O76064 485 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 SSTR3P32745 418 aaPredicted RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 NOA1Q8NC60 698 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 ESYT2A0FGR8 921 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 CCNA1P78396 465 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 KRT81Q14533 505 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 CATSPER3Q86XQ3 398 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 NFAT5O94916 1531 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 POC1B-GALNT4F8VUJ3 575 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 ENTPD3O75355 529 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 POLR2BP30876 1174 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 ARL1P40616 181 aaPredicted RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 JAK3P52333 1124 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 EPHA7Q15375 998 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 HADHQ16836 314 aaKnown RBP17.57■□□□□ 0.4
CUX1-213ENST00000549414 VSIG1Q86XK7 387 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 FAM114A2Q9NRY5 505 aa17.57■□□□□ 0.4
CUX1-213ENST00000549414 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
CUX1-213ENST00000549414 PMS1P54277 932 aaKnown RBP17.56■□□□□ 0.4
CUX1-213ENST00000549414 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
CUX1-213ENST00000549414 EP400NLQ6ZTU2 488 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 SPATA4Q8NEY3 305 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
CUX1-213ENST00000549414 KCNQ5Q9NR82 932 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 RSPH10B2B2RC85 870 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 RSPH10BP0C881 870 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 KRT76Q01546 638 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 DR1Q01658 176 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 HEMGNQ9BXL5 484 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 VCPKMTQ9H867 229 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 HESX1Q9UBX0 185 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 CNOT8Q9UFF9 292 aaKnown RBP17.56■□□□□ 0.4
CUX1-213ENST00000549414 ANAPC7Q9UJX3 599 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 FHOD1Q9Y613 1164 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 DUSP10Q9Y6W6 482 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 PDXKO00764 312 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 HOXA7P31268 230 aaPredicted RBP17.56■□□□□ 0.4
CUX1-213ENST00000549414 DAGLBQ8NCG7 672 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 TRIM7Q9C029 511 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 KBTBD4Q9NVX7 518 aa17.56■□□□□ 0.4
CUX1-213ENST00000549414 FTLP02792 175 aaPredicted RBP17.55■□□□□ 0.4
CUX1-213ENST00000549414 ALDH3A1P30838 453 aa17.55■□□□□ 0.4
CUX1-213ENST00000549414 GGCXP38435 758 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms