RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TAZQ16635 292 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 SPDYCQ5MJ68 293 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 CELF3Q5SZQ8 465 aaKnown RBP5.46□□□□□ -1.53
SCAF11-212ENST00000549162 METTL7BQ6UX53 244 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 CYP26C1Q6V0L0 522 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 CCAR1Q8IX12 1150 aaKnown RBP5.46□□□□□ -1.53
SCAF11-212ENST00000549162 EFCAB13Q8IY85 973 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 REXO1Q8N1G1 1221 aaKnown RBP5.46□□□□□ -1.53
SCAF11-212ENST00000549162 DNAJC5GQ8N7S2 189 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 SECISBP2LQ93073 1101 aaKnown RBP5.46□□□□□ -1.53
SCAF11-212ENST00000549162 ZDHHC16Q969W1 377 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 PANX2Q96RD6 677 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 FUT8Q9BYC5 575 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 RAB34Q9BZG1 259 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 DNAAF2Q9NVR5 837 aaKnown RBP5.46□□□□□ -1.53
SCAF11-212ENST00000549162 ASNSD1Q9NWL6 643 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 KIAA1468Q9P260 1216 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 PCDHGB7Q9Y5F8 929 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 MCM3APO60318 1980 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 PPP1R12AO14974 1030 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-212ENST00000549162 SPAG1Q07617 926 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 ILF2Q12905 390 aaKnown RBP5.46□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC142Q17RM4 750 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 DUSP28Q4G0W2 176 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 CEP55Q53EZ4 464 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 LRRC15Q8TF66 581 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 SPATC1LQ9H0A9 340 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 PRO3102Q9H379 93 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 DDX41Q9UJV9 622 aaKnown RBP5.46□□□□□ -1.54
SCAF11-212ENST00000549162 SOWAHBA6NEL2 793 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 RRN3P2A6NIE6 340 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 GCOM1H8Y6P7 765 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF623O75123 536 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 ZBED4O75132 1171 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 FARP2O94887 1054 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-212ENST00000549162 POLR2MP0CAP2 368 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 NRG1Q02297 640 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-212ENST00000549162 NEDD9Q14511 834 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 NBPF9Q3BBW0 867 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF394Q53GI3 561 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 MMS22LQ6ZRQ5 1243 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 PHTF2Q8N3S3 785 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 KIFAP3Q92845 792 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 PMM1Q92871 262 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 GOLPH3LQ9H4A5 285 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 PCDH12Q9NPG4 1184 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 MYO1AQ9UBC5 1043 aa5.46□□□□□ -1.54
SCAF11-212ENST00000549162 KCNE1P15382 129 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 TNFRSF8P28908 595 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 NAMPTP43490 491 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 APLP1P51693 650 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 CCNA1P78396 465 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MCL1Q07820 350 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 LAMC2Q13753 1193 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 GNL2Q13823 731 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 NR1I3Q14994 352 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 EFHC2Q5JST6 749 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 RGMBQ6NW40 437 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 ENOSF1Q7L5Y1 443 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 SRGAP1Q7Z6B7 1085 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 NLRX1Q86UT6 975 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 TMEM139Q8IV31 216 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 DIS3L2Q8IYB7 885 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF454Q8N9F8 522 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 C1orf131Q8NDD1 294 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 NSUN6Q8TEA1 469 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 PCYT2Q99447 389 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MOV10L1Q9BXT6 1211 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 IRF2BPLQ9H1B7 796 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 VTI1BQ9UEU0 232 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 HOOK1Q9UJC3 728 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MRVI1Q9Y6F6 885 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 POTEFA5A3E0 1075 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MAGEB2O15479 319 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 KIF20AO95235 890 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 SUPT20HL2P0C7V6 817 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 HSD3B2P26439 372 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MAPK8P45983 427 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MLLT6P55198 1093 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 FRG1Q14331 258 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 SURF1Q15526 300 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 PLEKHG6Q3KR16 790 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 LMO3Q8TAP4 145 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 BRI3BPQ8WY22 251 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 DCPSQ96C86 337 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 RBCK1Q9BYM8 510 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 FNIP2Q9P278 1114 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 G3BP2Q9UN86 482 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MSH4O15457 936 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 COL9A1P20849 921 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 MRE11P49959 708 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 ERVK-9P63128 1117 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 ERVK-24P63145 666 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 RACK1P63244 317 aaKnown RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 LMNB2Q03252 620 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 STX1AQ16623 288 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 ARTNQ5T4W7 220 aa5.45□□□□□ -1.54
SCAF11-212ENST00000549162 APBB1IPQ7Z5R6 666 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF677Q86XU0 584 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms