RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 AGBL1Q96MI9 1066 aa16.98■□□□□ 0.31
BRF1-212ENST00000547562 NAGPAQ9UK23 515 aa16.98■□□□□ 0.31
BRF1-212ENST00000547562 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
BRF1-212ENST00000547562 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
BRF1-212ENST00000547562 GRID2IPA4D2P6 1211 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 COG2Q14746 738 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 ODR4Q5SWX8 454 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 KSR1Q8IVT5 923 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 MS4A14Q96JA4 679 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 GDAP1L1Q96MZ0 367 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 PDGFDQ9GZP0 370 aaPredicted RBP16.97■□□□□ 0.31
BRF1-212ENST00000547562 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 RBM12Q9NTZ6 932 aaKnown RBP16.97■□□□□ 0.31
BRF1-212ENST00000547562 ZNF536O15090 1300 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
BRF1-212ENST00000547562 ITGB5P18084 799 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 KCNA3P22001 575 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 GUCY2CP25092 1073 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 INPP5BP32019 993 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 HS2ST1Q7LGA3 356 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 BANK1Q8NDB2 785 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 NEK9Q8TD19 979 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 ZBED3Q96IU2 234 aaPredicted RBP16.97■□□□□ 0.31
BRF1-212ENST00000547562 STIM2Q9P246 746 aa16.97■□□□□ 0.31
BRF1-212ENST00000547562 RPTORQ8N122 1335 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 A0A0U1RQG5 324 aaPredicted RBP16.96■□□□□ 0.31
BRF1-212ENST00000547562 ARHGEF35A5YM69 484 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 FLOT1O75955 427 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 BCRP11274 1271 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 HINFPQ9BQA5 517 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 AGPAT3Q9NRZ7 376 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 DMAC2Q9NW81 257 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 FER1L6Q2WGJ9 1857 aa16.96■□□□□ 0.31
BRF1-212ENST00000547562 WNT10BO00744 389 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 DPEP1P16444 411 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 SLC7A5Q01650 507 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 GLE1Q53GS7 698 aaKnown RBP16.96■□□□□ 0.3
BRF1-212ENST00000547562 C8orf74Q6P047 294 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.3
BRF1-212ENST00000547562 GJB7Q6PEY0 223 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 COL20A1Q9P218 1284 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 NENFQ9UMX5 172 aa16.96■□□□□ 0.3
BRF1-212ENST00000547562 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 DDX39AO00148 427 aaKnown RBP16.95■□□□□ 0.3
BRF1-212ENST00000547562 PHACTR2O75167 634 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 SYF2O95926 243 aaKnown RBP16.95■□□□□ 0.3
BRF1-212ENST00000547562 FMO5P49326 533 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 VPS36Q86VN1 386 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 KCNH7Q9NS40 1196 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 PACSIN2Q9UNF0 486 aaPredicted RBP16.95■□□□□ 0.3
BRF1-212ENST00000547562 FRMD4BQ9Y2L6 1034 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 NFIBO00712 420 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 HIP1RO75146 1068 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 LMAN1P49257 510 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 DNA2P51530 1060 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 MRPS25P82663 173 aaKnown RBP16.95■□□□□ 0.3
BRF1-212ENST00000547562 MAPK7Q13164 816 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 DAW1Q8N136 415 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
BRF1-212ENST00000547562 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 STRA6Q9BX79 667 aa16.95■□□□□ 0.3
BRF1-212ENST00000547562 PHF20L1A8MW92 1017 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 PPP1R37O75864 691 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 FERP16591 822 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 TNFRSF8P28908 595 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 CYP2J2P51589 502 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 NIPA1Q7RTP0 329 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 MIER3Q7Z3K6 550 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 INPP4AQ96PE3 977 aaPredicted RBP16.94■□□□□ 0.3
BRF1-212ENST00000547562 WDR46O15213 610 aaKnown RBP16.94■□□□□ 0.3
BRF1-212ENST00000547562 RNF40O75150 1001 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 STAT1P42224 750 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 CXCL9Q07325 125 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 IFI16Q16666 785 aaKnown RBP16.94■□□□□ 0.3
BRF1-212ENST00000547562 PADI6Q6TGC4 694 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 PKD2L1Q9P0L9 805 aa16.94■□□□□ 0.3
BRF1-212ENST00000547562 DHX15O43143 795 aaKnown RBP16.93■□□□□ 0.3
BRF1-212ENST00000547562 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
BRF1-212ENST00000547562 EPHB4P54760 987 aa16.93■□□□□ 0.3
BRF1-212ENST00000547562 GHRHRQ02643 423 aa16.93■□□□□ 0.3
BRF1-212ENST00000547562 TNIP1Q15025 636 aa16.93■□□□□ 0.3
BRF1-212ENST00000547562 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
BRF1-212ENST00000547562 SLC9A9Q8IVB4 645 aa16.93■□□□□ 0.3
BRF1-212ENST00000547562 F8VZ95 297 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 DDX3XO00571 662 aaKnown RBP eCLIP16.92■□□□□ 0.3
BRF1-212ENST00000547562 CES2O00748 559 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 GFPT2O94808 682 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 NOP2P46087 812 aaKnown RBP16.92■□□□□ 0.3
BRF1-212ENST00000547562 CBWD6Q4V339 395 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 CBWD3Q5JTY5 395 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 CBWD5Q5RIA9 395 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
BRF1-212ENST00000547562 SND1Q7KZF4 910 aaKnown RBP eCLIP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms