RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 RPLP2P05387 115 aaKnown RBP25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 BFSP2Q13515 415 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 TPRNQ4KMQ1 711 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 PADI6Q6TGC4 694 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 SH3RF1Q7Z6J0 888 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 RSPH3Q86UC2 560 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 LRRC71Q8N4P6 559 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 SYT2Q8N9I0 419 aaPredicted RBP25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 LRRC15Q8TF66 581 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 DNAJB3Q8WWF6 145 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 WNT8BQ93098 351 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 FAM49AQ9H0Q0 323 aaPredicted RBP25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 BLOC1S4Q9NUP1 217 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 LOXHD1Q8IVV2 1947 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 ARID2Q68CP9 1835 aa25.79■■□□□ 1.72
SMARCD1-203ENST00000547247 KIAA0355O15063 1070 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 USO1O60763 962 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 PLA2G4BP0C869 781 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 STAT6P42226 847 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 DNM2P50570 870 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 EMC2Q15006 297 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 RPAINQ86UA6 219 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 TMEM87AQ8NBN3 555 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 LARP4BQ92615 738 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 RAD54LQ92698 747 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 NOC4LQ9BVI4 516 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 HIPK3Q9H422 1215 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 ATP6V0A4Q9HBG4 840 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 BMP2KQ9NSY1 1161 aaPredicted RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 EVPLQ92817 2033 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 A0A1B0GVL5 298 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 GAS2O43903 313 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 SSBP05455 408 aaKnown RBP eCLIP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 CLCN3P51790 818 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 TRIM71Q2Q1W2 868 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 NAALADL2Q58DX5 795 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 KIAA0319LQ8IZA0 1049 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 LINC01465Q8N7H1 131 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 MRPS27Q92552 414 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 GBP4Q96PP9 640 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 MAP7D2Q96T17 732 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 MTRQ99707 1265 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 PYM1Q9BRP8 204 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 KCNH3Q9ULD8 1083 aa25.78■■□□□ 1.72
SMARCD1-203ENST00000547247 TRIM43BA6NCK2 446 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 PITPNM1O00562 1244 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 POLR2DO15514 142 aaKnown RBP25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 PFKFB1P16118 471 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 THPOP40225 353 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 SLC12A3P55017 1021 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 RBL2Q08999 1139 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 NME8Q8N427 588 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 FSIP1Q8NA03 581 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 IQUBQ8NA54 791 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 TRIM43Q96BQ3 446 aaPredicted RBP25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 PPP1R12CQ9BZL4 782 aa25.77■■□□□ 1.72
SMARCD1-203ENST00000547247 CAND2O75155 1236 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 CKBP12277 381 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 CYP11B2P19099 503 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 DHX8Q14562 1220 aaKnown RBP25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 MCM6Q14566 821 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 MCPH1Q8NEM0 835 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 TCP11Q8WWU5 503 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 XPNPEP1Q9NQW7 623 aa25.76■■□□□ 1.71
SMARCD1-203ENST00000547247 FAM237AA0A1B0GTK4 181 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 H0YGN5 161 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 RAG1P15918 1043 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 MKRN4PQ13434 485 aaPredicted RBP25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 E2F4Q16254 413 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 RINT1Q6NUQ1 792 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 DHX58Q96C10 678 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 CUEDC2Q9H467 287 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 AKT3Q9Y243 479 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 HPSEQ9Y251 543 aa25.75■■□□□ 1.71
SMARCD1-203ENST00000547247 TIMP1P01033 207 aa25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 DRP2Q13474 957 aa25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 IER5Q5VY09 327 aa25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 TMEM143Q96AN5 459 aa25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 KCND2Q9NZV8 630 aa25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 SUCLA2Q9P2R7 463 aaPredicted RBP25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 ZMYND8Q9ULU4 1186 aaPredicted RBP25.74■■□□□ 1.71
SMARCD1-203ENST00000547247 VTNP04004 478 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 NDUFA8P51970 172 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 ZNF618Q5T7W0 954 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 PRPF38BQ5VTL8 546 aaKnown RBP25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 C1orf186Q6ZWK4 172 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 SV2BQ7L1I2 683 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 MAEAQ7L5Y9 396 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 RUSC1Q9BVN2 902 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 UMODL1Q5DID0 1318 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 CTSHP09668 335 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 SELPP16109 830 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 SYN1P17600 705 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 CYP2C18P33260 490 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 SYKP43405 635 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 MRPS6P82932 125 aaKnown RBP25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 GPBP1Q86WP2 473 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 PSPC1Q8WXF1 523 aaKnown RBP25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 GOLPH3LQ9H4A5 285 aa25.73■■□□□ 1.71
SMARCD1-203ENST00000547247 M0QZ92 97 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms