RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, human

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-208	ENST00000547061	C9orf50	Q5SZB4	431 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CXCL17	Q6UXB2	119 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	KRT25	Q7Z3Z0	450 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	SGMS1	Q86VZ5	419 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	RGL4	Q8IZJ4	473 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	KCTD17	Q8N5Z5	321 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	RNPC3	Q96LT9	517 aa	Known RBP	7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	GUCD1	Q96NT3	240 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ARID3A	Q99856	593 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	HIPK3	Q9H422	1215 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	C11orf16	Q9NQ32	467 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PDGFC	Q9NRA1	345 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	DDX41	Q9UJV9	622 aa	Known RBP	7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	HCN2	Q9UL51	889 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PCDHA1	Q9Y5I3	950 aa		7.44	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ZNFX1	Q9P2E3	1918 aa	Known RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061		E7EWF7	191 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	GCOM1	H8Y6P7	765 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	hCG_1984214	I3L0E3	225 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	HAS3	O00219	553 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	OPLAH	O14841	1288 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	F2	P00734	622 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	HMGB1	P09429	215 aa	Known RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	POLR2M	P0CAP2	368 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	RARA	P10276	462 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	HOXC8	P31273	242 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	MCM5	P33992	734 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	EPHB4	P54760	987 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	NAA30	Q147X3	362 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	NECTIN1	Q15223	517 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PRRT3	Q5FWE3	981 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	SLC30A10	Q6XR72	485 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	NOL8	Q76FK4	1167 aa	Known RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CATIP	Q7Z7H3	387 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	RALYL	Q86SE5	291 aa	Known RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	RPAIN	Q86UA6	219 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	FBXO16	Q8IX29	292 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	MB21D2	Q8IYB1	491 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	FAM177A1	Q8N128	213 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CMTR1	Q8N1G2	835 aa	Known RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ZNF713	Q8N859	430 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	SLC17A8	Q8NDX2	589 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	TTC16	Q8NEE8	873 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	AFAP1L1	Q8TED9	768 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CDHR1	Q96JP9	859 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	INPP4A	Q96PE3	977 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CDX2	Q99626	313 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PDCD2L	Q9BRP1	358 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	GLT8D2	Q9H1C3	349 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PXMP2	Q9NR77	195 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	SMCHD1	A6NHR9	2005 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	FRMPD2	Q68DX3	1309 aa	Predicted RBP	7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061	FRMPD3	Q5JV73	1810 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061		A0A0C4DFX4	3053 aa		7.43	□□□□□ -1.22
RACGAP1-208	ENST00000547061		M0R082	166 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	IFIT3	O14879	490 aa	Known RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	B4GALT4	O60513	344 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CXCL10	P02778	98 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ACTN1	P12814	892 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CSF2RA	P15509	400 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CALML3	P27482	149 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ARHGAP1	Q07960	439 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	NEDD9	Q14511	834 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	WTAP	Q15007	396 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	GNPTAB	Q3T906	1256 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CELF3	Q5SZQ8	465 aa	Known RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ARHGEF16	Q5VV41	709 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	MCTP2	Q6DN12	878 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ZNF365	Q70YC5	407 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	OR6J1	Q8NGC5	347 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ZNF417	Q8TAU3	575 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PIK3R5	Q8WYR1	880 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	KCNB2	Q92953	911 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	TAAR1	Q96RJ0	339 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.42	□□□□□ -1.22	7e-7	■■□□□ 13.6
RACGAP1-208	ENST00000547061	USP26	Q9BXU7	913 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	GSX2	Q9BZM3	304 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	UBA5	Q9GZZ9	404 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	LMCD1	Q9NZU5	365 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	DMGDH	Q9UI17	866 aa	Known RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	LRFN2	Q9ULH4	789 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ISY1	Q9ULR0	285 aa	Known RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PCDHA11	Q9Y5I1	949 aa		7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	COL11A1	P12107	1806 aa	Predicted RBP	7.42	□□□□□ -1.22
RACGAP1-208	ENST00000547061	MYH4	Q9Y623	1939 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	CYTH3	O43739	400 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	LILRB5	O75023	590 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	XYLB	O75191	536 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	IGHA1	P01876	353 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	MMP3	P08254	477 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	IQCF3	P0C7M6	154 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	BEX3	Q00994	111 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	PTH1R	Q03431	593 aa		7.41	□□□□□ -1.22
RACGAP1-208	ENST00000547061	KRT32	Q14532	448 aa		7.41	□□□□□ -1.22

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