RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 NEIL1Q96FI4 390 aaPredicted RBP8.21□□□□□ -1.1
CPNE8-204ENST00000546603 TARS2Q9BW92 718 aaKnown RBP8.21□□□□□ -1.1
CPNE8-204ENST00000546603 DSG1Q02413 1049 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 NFYCQ13952 458 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 PCOLCEQ15113 449 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPNE8-204ENST00000546603 CREB3L3Q68CJ9 461 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 USP30Q70CQ3 517 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 FILIP1Q7Z7B0 1213 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 NXPE1Q8N323 547 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 LRRC37BQ96QE4 947 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 TUBGCP5Q96RT8 1024 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 TOMM22Q9NS69 142 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 TMA7Q9Y2S6 64 aaKnown RBP8.2□□□□□ -1.1
CPNE8-204ENST00000546603 NR2E1Q9Y466 385 aa8.2□□□□□ -1.1
CPNE8-204ENST00000546603 ARHGAP6O43182 974 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 RGS3P49796 1198 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 MRE11P49959 708 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 SCNN1BP51168 640 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 SART3Q15020 963 aaKnown RBP8.19□□□□□ -1.1
CPNE8-204ENST00000546603 RNF151Q2KHN1 245 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 AGBL4Q5VU57 503 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 TIGD7Q6NT04 549 aaPredicted RBP8.19□□□□□ -1.1
CPNE8-204ENST00000546603 EFHBQ8N7U6 833 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 DNERQ8NFT8 737 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 KIAA1683Q9H0B3 1180 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 VWA7Q9Y334 891 aa8.19□□□□□ -1.1
CPNE8-204ENST00000546603 ZNF891A8MT65 544 aaPredicted RBP8.18□□□□□ -1.1
CPNE8-204ENST00000546603 PATE3B3GLJ2 98 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 BCAR1P56945 870 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 SESN2P58004 480 aaPredicted RBP8.18□□□□□ -1.1
CPNE8-204ENST00000546603 ADAM17P78536 824 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 NFKB2Q00653 900 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 OCRLQ01968 901 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 TAX1BP1Q86VP1 789 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 GIMAP8Q8ND71 665 aaPredicted RBP8.18□□□□□ -1.1
CPNE8-204ENST00000546603 GNRHR2Q96P88 292 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 C1QTNF3Q9BXJ4 246 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPNE8-204ENST00000546603 MSL2Q9HCI7 577 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 THG1LQ9NWX6 298 aaKnown RBP8.18□□□□□ -1.1
CPNE8-204ENST00000546603 KCMF1Q9P0J7 381 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 SAE1Q9UBE0 346 aaPredicted RBP8.18□□□□□ -1.1
CPNE8-204ENST00000546603 ST6GALNAC2Q9UJ37 374 aa8.18□□□□□ -1.1
CPNE8-204ENST00000546603 MAFGO15525 162 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 CR2P20023 1033 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 STAT5BP51692 787 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 KPNA1P52294 538 aaPredicted RBP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 ICAM4Q14773 271 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 NOLC1Q14978 699 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 DGKDQ16760 1214 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 PRAMEF9Q5VWM5 478 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 ESRP1Q6NXG1 681 aaKnown RBP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 PHYKPLQ8IUZ5 450 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 C7orf31Q8N865 590 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 OR2W6PQ8NHA6 318 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 CHTF18Q8WVB6 975 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 RPGRQ92834 1020 aaKnown RBP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 GPR20Q99678 358 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 KRTAP4-9Q9BYQ8 210 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 H2AFY2Q9P0M6 372 aaPredicted RBP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 PUF60Q9UHX1 559 aaKnown RBP8.17□□□□□ -1.1
CPNE8-204ENST00000546603 FAM184BQ9ULE4 1060 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
CPNE8-204ENST00000546603 ZNF623O75123 536 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 MYCLP1P12525 358 aaPredicted RBP8.16□□□□□ -1.1
CPNE8-204ENST00000546603 CD40P25942 277 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 HSD3B2P26439 372 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 GYS2P54840 703 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 LRRC32Q14392 662 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 TBR1Q16650 682 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 DBX2Q6ZNG2 339 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 BCL6BQ8N143 479 aaPredicted RBP8.16□□□□□ -1.1
CPNE8-204ENST00000546603 SMC1BQ8NDV3 1235 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 LPPQ93052 612 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 SLKQ9H2G2 1235 aaPredicted RBP8.16□□□□□ -1.1
CPNE8-204ENST00000546603 C12orf65Q9H3J6 166 aaKnown RBP8.16□□□□□ -1.1
CPNE8-204ENST00000546603 DEF6Q9H4E7 631 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 CD248Q9HCU0 757 aa8.16□□□□□ -1.1
CPNE8-204ENST00000546603 A0A087X0B3 334 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 GSG1L2A8MUP6 293 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 H2AFYO75367 372 aaKnown RBP8.15□□□□□ -1.1
CPNE8-204ENST00000546603 ZNF20P17024 532 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 TCTN3Q6NUS6 607 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 KLHDC10Q6PID8 442 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 GFM2Q969S9 779 aaKnown RBP8.15□□□□□ -1.1
CPNE8-204ENST00000546603 MAPRE3Q9UPY8 281 aa8.15□□□□□ -1.1
CPNE8-204ENST00000546603 PDE8AO60658 829 aa8.14□□□□□ -1.11
CPNE8-204ENST00000546603 CDC14BO60729 498 aa8.14□□□□□ -1.11
CPNE8-204ENST00000546603 SMAD3P84022 425 aaKnown RBP8.14□□□□□ -1.11
CPNE8-204ENST00000546603 ADCY2Q08462 1091 aa8.14□□□□□ -1.11
CPNE8-204ENST00000546603 MYBPC3Q14896 1274 aa8.14□□□□□ -1.11
CPNE8-204ENST00000546603 SEPT7Q16181 437 aaKnown RBP8.14□□□□□ -1.11
CPNE8-204ENST00000546603 KANSL1Q7Z3B3 1105 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms