RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 SLC18A3Q16572 532 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 HHIPL2Q6UWX4 724 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 WRNIP1Q96S55 665 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 NYAP2Q9P242 653 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 PLAGL2Q9UPG8 496 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 A0A087X0T9 212 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 EYA4O95677 639 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 FAM228BP0C875 321 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 LACTBP83111 547 aaPredicted RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 IL17AQ16552 155 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 KCNK18Q7Z418 384 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 RNF10Q8N5U6 811 aaKnown RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 STX2P32856 288 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 BRDTQ58F21 947 aaPredicted RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 SNRNP48Q6IEG0 339 aaKnown RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 CACNA2D3Q8IZS8 1091 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 CCDC89Q8N998 374 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 PRPF38AQ8NAV1 312 aaKnown RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 DAGLBQ8NCG7 672 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 SUGT1Q9Y2Z0 365 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 CD2APQ9Y5K6 639 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 POC1B-GALNT4F8VUJ3 575 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 K7ERI5 159 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 ABL1P00519 1130 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 QARSP47897 775 aaKnown RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 PPP2R5DQ14738 602 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 CCDC6Q16204 474 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 INTS8Q75QN2 995 aaKnown RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 RPUSD2Q8IZ73 545 aaKnown RBP16.94■□□□□ 0.3
CUX1-211ENST00000546411 RNF146Q9NTX7 359 aa16.94■□□□□ 0.3
CUX1-211ENST00000546411 A6NNZ2 444 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
CUX1-211ENST00000546411 ACSL3O95573 720 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 CASP4P49662 377 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 PSMC6P62333 389 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 E2F4Q16254 413 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 SWSAP1Q6NVH7 229 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 CTAGE3PQ8IX95 158 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 ERGIC2Q96RQ1 377 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 DNAI2Q9GZS0 605 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 BAIAP2L1Q9UHR4 511 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 FEZ2Q9UHY8 353 aaPredicted RBP16.93■□□□□ 0.3
CUX1-211ENST00000546411 ESYT2A0FGR8 921 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 VAMP7P51809 220 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 RASA3Q14644 834 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 ZNF354CQ86Y25 554 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 RTKN2Q8IZC4 609 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 AGBL1Q96MI9 1066 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 INTS2Q9H0H0 1204 aaKnown RBP16.93■□□□□ 0.3
CUX1-211ENST00000546411 GABBR1Q9UBS5 961 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 TBX2Q13207 712 aaPredicted RBP16.93■□□□□ 0.3
CUX1-211ENST00000546411 HAUS6Q7Z4H7 955 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 VSIG1Q86XK7 387 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 DDX42Q86XP3 938 aaKnown RBP eCLIP16.93■□□□□ 0.3
CUX1-211ENST00000546411 ZBTB8OSQ8IWT0 167 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 HAUS1Q96CS2 278 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 RAB20Q9NX57 234 aa16.93■□□□□ 0.3
CUX1-211ENST00000546411 DAPK3O43293 454 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 KRT14P02533 472 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 ATF2P15336 505 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 DUSP9Q99956 384 aaKnown RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 ARHGAP20Q9P2F6 1191 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 PARP2Q9UGN5 583 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 LTN1O94822 1766 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 PDXKO00764 312 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 EVI5O60447 810 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 HERVK_113P62684 666 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 SETDB1Q15047 1291 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 PPP2R5EQ16537 467 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 GKAP1Q5VSY0 366 aaPredicted RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 FAM114A2Q9NRY5 505 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 INTS9Q9NV88 658 aaKnown RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 ATP2A2P16615 1042 aaKnown RBP16.92■□□□□ 0.3
CUX1-211ENST00000546411 CDAN1Q8IWY9 1227 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 THNSL1Q8IYQ7 743 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 FERMT1Q9BQL6 677 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 PACSIN1Q9BY11 444 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 FUT8Q9BYC5 575 aa16.92■□□□□ 0.3
CUX1-211ENST00000546411 PSMD14O00487 310 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 PPFIA4O75335 1185 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 RPA1P27694 616 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 ATP5DP30049 168 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 ARHGAP25P42331 645 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 GALCP54803 685 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 NPEPPSP55786 919 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 FUT2Q10981 343 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
CUX1-211ENST00000546411 SULF1Q8IWU6 871 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 MSH4O15457 936 aa16.91■□□□□ 0.3
CUX1-211ENST00000546411 CARSP49589 748 aaKnown RBP16.91■□□□□ 0.3
CUX1-211ENST00000546411 CENPPQ6IPU0 288 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms