RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CELF4Q9BZC1 486 aaKnown RBP18.77■□□□□ 0.6
LTBR-215ENST00000546296 MTIF3Q9H2K0 278 aaKnown RBP18.77■□□□□ 0.6
LTBR-215ENST00000546296 KAT6AQ92794 2004 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.59
LTBR-215ENST00000546296 A0A1W2PPC1 479 aa18.76■□□□□ 0.59
LTBR-215ENST00000546296 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
LTBR-215ENST00000546296 UBA7P41226 1012 aa18.76■□□□□ 0.59
LTBR-215ENST00000546296 MGAT3Q09327 533 aa18.76■□□□□ 0.59
LTBR-215ENST00000546296 GPNMBQ14956 572 aa18.76■□□□□ 0.59
LTBR-215ENST00000546296 SLC39A14Q15043 492 aa18.76■□□□□ 0.59
LTBR-215ENST00000546296 CDK5RAP3Q96JB5 506 aa18.76■□□□□ 0.59
LTBR-215ENST00000546296 BMP2KQ9NSY1 1161 aaPredicted RBP18.76■□□□□ 0.59
LTBR-215ENST00000546296 DDX19AQ9NUU7 478 aaKnown RBP18.76■□□□□ 0.59
LTBR-215ENST00000546296 SUCLA2Q9P2R7 463 aaPredicted RBP18.76■□□□□ 0.59
LTBR-215ENST00000546296 IGKV6-21A0A0C4DH24 114 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 ARHGEF35A5YM69 484 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 ZBBXA8MT70 800 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 CXCL10P02778 98 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 GHRP10912 638 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 NASPP49321 788 aaPredicted RBP18.75■□□□□ 0.59
LTBR-215ENST00000546296 RARRES1P49788 294 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 ECM1Q16610 540 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 KIZQ2M2Z5 673 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 ATL3Q6DD88 541 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 CNKSR3Q6P9H4 555 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 CABP7Q86V35 215 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 ZNF710Q8N1W2 664 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 LINC01465Q8N7H1 131 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 RASSF8Q8NHQ8 419 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 SEPT8Q92599 483 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 SCLT1Q96NL6 688 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
LTBR-215ENST00000546296 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
LTBR-215ENST00000546296 DBR1Q9UK59 544 aaKnown RBP18.75■□□□□ 0.59
LTBR-215ENST00000546296 CFAP45Q9UL16 551 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 DNM3Q9UQ16 869 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 ZDHHC9Q9Y397 364 aa18.75■□□□□ 0.59
LTBR-215ENST00000546296 SRPRBQ9Y5M8 271 aaKnown RBP18.75■□□□□ 0.59
LTBR-215ENST00000546296 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 SPTLC2O15270 562 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 DGAT1O75907 488 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 NLRP11P59045 1033 aaKnown RBP18.74■□□□□ 0.59
LTBR-215ENST00000546296 CDC42EP1Q00587 391 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 GRIN1Q05586 938 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 EMC2Q15006 297 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 FBXO47Q5MNV8 452 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
LTBR-215ENST00000546296 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 DBF4BQ8NFT6 615 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 HERVK_113Q902F9 699 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 TMEM143Q96AN5 459 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 VWCEQ96DN2 955 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 CALML4Q96GE6 196 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 PLIN2Q99541 437 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 MTRQ99707 1265 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 CSRNP2Q9H175 543 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 FBXO2Q9UK22 296 aaPredicted RBP18.74■□□□□ 0.59
LTBR-215ENST00000546296 ATP6V1DQ9Y5K8 247 aa18.74■□□□□ 0.59
LTBR-215ENST00000546296 GAS2O43903 313 aaKnown RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 YEATS4O95619 227 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 CRYBB1P53674 252 aaPredicted RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 NUCB2P80303 420 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 DRP2Q13474 957 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 IKBKEQ14164 716 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 LPIN1Q14693 890 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 RHPN2Q8IUC4 686 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 NLRP7Q8WX94 980 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 ZNF668Q96K58 619 aaPredicted RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
LTBR-215ENST00000546296 OSBPL7Q9BZF2 842 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 NT5C3AQ9H0P0 336 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 CDHR5Q9HBB8 845 aa18.73■□□□□ 0.59
LTBR-215ENST00000546296 E9PMD0 336 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 SLC26A4O43511 780 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
LTBR-215ENST00000546296 GPR32O75388 356 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 PLEKHG4Q58EX7 1191 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 HABP4Q5JVS0 413 aaKnown RBP18.72■□□□□ 0.59
LTBR-215ENST00000546296 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 PADI6Q6TGC4 694 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 TSHZ1Q6ZSZ6 1077 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 PRPF31Q8WWY3 499 aaKnown RBP18.72■□□□□ 0.59
LTBR-215ENST00000546296 PSPC1Q8WXF1 523 aaKnown RBP18.72■□□□□ 0.59
LTBR-215ENST00000546296 OSMRQ99650 979 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 BHMT2Q9H2M3 363 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 ADAMTS10Q9H324 1103 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 SLC4A7Q9Y6M7 1214 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 SQORQ9Y6N5 450 aa18.72■□□□□ 0.59
LTBR-215ENST00000546296 MORC2Q9Y6X9 1032 aaPredicted RBP18.72■□□□□ 0.59
LTBR-215ENST00000546296 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 BAIAP3O94812 1187 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 EYA4O95677 639 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 SSBP05455 408 aaKnown RBP eCLIP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms