RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 NACA2Q9H009 215 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 TCP11L1Q9NUJ3 509 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 ABCF3Q9NUQ8 709 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 TBC1D7Q9P0N9 293 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 PAIP2BQ9ULR5 123 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 H0Y3Z8 333 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CTNND1O60716 968 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 UBOX5O94941 541 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 ALOX15P16050 662 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 TM4SF1P30408 202 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 UBA7P41226 1012 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 HLTFQ14527 1009 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBR1-202ENST00000546274 TRADDQ15628 312 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CDC37Q16543 378 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 HEATR3Q7Z4Q2 680 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CCNJLQ8IV13 435 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 SLC44A5Q8NCS7 719 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 KIAA0895Q8NCT3 520 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 FBF1Q8TES7 1133 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CTNNBL1Q8WYA6 563 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 CNOT6LQ96LI5 555 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 CPVLQ9H3G5 476 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 ECT2Q9H8V3 914 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 TRIM33Q9UPN9 1127 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CD2APQ9Y5K6 639 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 MYH7BA7E2Y1 1941 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 DCDC2CA8MYV0 355 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 GLI1P08151 1106 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 PLEKP08567 350 aaPredicted RBP8.53□□□□□ -1.04
UBR1-202ENST00000546274 DRD4P21917 467 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CCNE1P24864 410 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 FOXB2Q5VYV0 432 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 HAUS3Q68CZ6 603 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 HPS3Q969F9 1004 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CAVIN3Q969G5 261 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 MKL1Q969V6 931 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 C7orf25Q9BPX7 421 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 TMEM47Q9BQJ4 181 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 ZMYND12Q9H0C1 365 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 NKX1-2Q9UD57 310 aaPredicted RBP8.53□□□□□ -1.04
UBR1-202ENST00000546274 SWAP70Q9UH65 585 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 SLC12A4Q9UP95 1085 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 A0A1W2PQJ5 194 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 EPHB6O15197 1021 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 KRT86O43790 486 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 VIMP08670 466 aaKnown RBP8.53□□□□□ -1.04
UBR1-202ENST00000546274 GOLGA8HP0CJ92 632 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 ETS2P15036 469 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CCNFP41002 786 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 RNASE9P60153 205 aaKnown RBP8.53□□□□□ -1.04
UBR1-202ENST00000546274 KRT83P78385 493 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CDK17Q00537 523 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CYP27A1Q02318 531 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
UBR1-202ENST00000546274 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
UBR1-202ENST00000546274 COBLL1Q53SF7 1204 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 FIGNQ5HY92 759 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 TRPM8Q7Z2W7 1104 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CABP7Q86V35 215 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 MMGT1Q8N4V1 131 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 RETREG2Q8NC44 543 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CHMP6Q96FZ7 201 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 GBP5Q96PP8 586 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 ERGIC2Q96RQ1 377 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CORO1BQ9BR76 489 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CUEDC2Q9H467 287 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 SLC12A6Q9UHW9 1150 aa8.53□□□□□ -1.04
UBR1-202ENST00000546274 CEP104O60308 925 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 TRIM21P19474 475 aaKnown RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 RASA1P20936 1047 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 MSH2P43246 934 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 MAGOHP61326 146 aaKnown RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 RNASELQ05823 741 aaKnown RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 MCL1Q07820 350 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 PDE4DQ08499 809 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 CCDC92Q53HC0 331 aaPredicted RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 NFRKBQ6P4R8 1299 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 ZNF365Q70YC5 407 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 DEFB132Q7Z7B7 95 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 CREG2Q8IUH2 290 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 IFT20Q8IY31 132 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 MAGOHBQ96A72 148 aaKnown RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 LBHD1Q9BQE6 289 aaPredicted RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 BRD8Q9H0E9 1235 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 MAGEF1Q9HAY2 307 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 DMAP1Q9NPF5 467 aaPredicted RBP8.52□□□□□ -1.04
UBR1-202ENST00000546274 SCOCQ9UIL1 159 aa8.52□□□□□ -1.04
UBR1-202ENST00000546274 GOLGA6L10A0A0M3HER8 536 aa8.52□□□□□ -1.05
UBR1-202ENST00000546274 ANO9A1A5B4 782 aa8.52□□□□□ -1.05
UBR1-202ENST00000546274 LSM1O15116 133 aaKnown RBP8.52□□□□□ -1.05
UBR1-202ENST00000546274 EDIL3O43854 480 aa8.52□□□□□ -1.05
UBR1-202ENST00000546274 HEXIM1O94992 359 aaKnown RBP8.52□□□□□ -1.05
UBR1-202ENST00000546274 SHBGP04278 402 aa8.52□□□□□ -1.05
UBR1-202ENST00000546274 OR52Z1P0C646 297 aa8.52□□□□□ -1.05
UBR1-202ENST00000546274 HNRNPH3P31942 346 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms