RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 MKRN4PQ13434 485 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-211ENST00000546215 TMEM119Q4V9L6 283 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 RSPH3Q86UC2 560 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 NME8Q8N427 588 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 KCTD17Q8N5Z5 321 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 SPATA32Q96LK8 384 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 SCAND2PQ9GZW5 306 aaPredicted RBP23.18■■□□□ 1.3
SCARB1-211ENST00000546215 SUGCTQ9HAC7 445 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 DNM3Q9UQ16 869 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 RANBP2P49792 3224 aaKnown RBP23.17■■□□□ 1.3
SCARB1-211ENST00000546215 E9PMD0 336 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 TMOD1P28289 359 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 RFC5P40937 340 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 MDM2Q00987 491 aaPredicted RBP23.17■■□□□ 1.3
SCARB1-211ENST00000546215 KARSQ15046 597 aaKnown RBP23.17■■□□□ 1.3
SCARB1-211ENST00000546215 LRRC8DQ7L1W4 858 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 EXOC8Q8IYI6 725 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 SLC7A3Q8WY07 619 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 CALML4Q96GE6 196 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 SCLYQ96I15 445 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 PLIN2Q99541 437 aa23.17■■□□□ 1.3
SCARB1-211ENST00000546215 JPH2Q9BR39 696 aaPredicted RBP23.17■■□□□ 1.3
SCARB1-211ENST00000546215 EYA4O95677 639 aa23.16■■□□□ 1.3
SCARB1-211ENST00000546215 MAGEA10P43363 369 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-211ENST00000546215 POLGP54098 1239 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-211ENST00000546215 DRP2Q13474 957 aa23.16■■□□□ 1.3
SCARB1-211ENST00000546215 FAM26DQ5JW98 314 aa23.16■■□□□ 1.3
SCARB1-211ENST00000546215 LRRC15Q8TF66 581 aa23.16■■□□□ 1.3
SCARB1-211ENST00000546215 CDK5RAP3Q96JB5 506 aa23.16■■□□□ 1.3
SCARB1-211ENST00000546215 CCDC43Q96MW1 224 aaKnown RBP23.16■■□□□ 1.3
SCARB1-211ENST00000546215 LBHD1Q9BQE6 289 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-211ENST00000546215 BHMT2Q9H2M3 363 aa23.16■■□□□ 1.3
SCARB1-211ENST00000546215 TANC1Q9C0D5 1861 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 RSPH10B2B2RC85 870 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 DGAT1O75907 488 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 CHRNA1P02708 482 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 CTSHP09668 335 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 RSPH10BP0C881 870 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 CSF2RAP15509 400 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 MGAT3Q09327 533 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 GPNMBQ14956 572 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 SHC4Q6S5L8 630 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 TMEM199Q8N511 208 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 XPNPEP1Q9NQW7 623 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 BMP2KQ9NSY1 1161 aaPredicted RBP23.15■■□□□ 1.3
SCARB1-211ENST00000546215 SCN5AQ14524 2016 aa23.15■■□□□ 1.3
SCARB1-211ENST00000546215 ARHGEF35A5YM69 484 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 PLCG1P19174 1290 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 TMEM62Q0P6H9 643 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 MBTPS1Q14703 1052 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 EMC2Q15006 297 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 VWCEQ96DN2 955 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 GDPD2Q9HCC8 539 aa23.14■■□□□ 1.3
SCARB1-211ENST00000546215 GAS2O43903 313 aaKnown RBP23.14■■□□□ 1.29
SCARB1-211ENST00000546215 VTNP04004 478 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 TXLNAP40222 546 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 MRPS6P82932 125 aaKnown RBP23.14■■□□□ 1.29
SCARB1-211ENST00000546215 IER5Q5VY09 327 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 PADI6Q6TGC4 694 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 MTRQ99707 1265 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 GDF15Q99988 308 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 ATP6V0A4Q9HBG4 840 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 AKT3Q9Y243 479 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 CDY2AQ9Y6F7 541 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 LOXHD1Q8IVV2 1947 aa23.14■■□□□ 1.29
SCARB1-211ENST00000546215 USO1O60763 962 aaKnown RBP23.13■■□□□ 1.29
SCARB1-211ENST00000546215 PARNO95453 639 aaKnown RBP23.13■■□□□ 1.29
SCARB1-211ENST00000546215 DNM2P50570 870 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 FPGSQ05932 587 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 RASSF8Q8NHQ8 419 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 TMEM143Q96AN5 459 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 MAP7D2Q96T17 732 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 BLOC1S4Q9NUP1 217 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 SUCLA2Q9P2R7 463 aaPredicted RBP23.13■■□□□ 1.29
SCARB1-211ENST00000546215 CCDC39Q9UFE4 941 aa23.13■■□□□ 1.29
SCARB1-211ENST00000546215 TET1Q8NFU7 2136 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 A0A087X0B3 334 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 RBAK-RBAKDNI3L0D1 243 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 NBNO60934 754 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 GPR32O75388 356 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 RFC2P35250 354 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 ADALQ6DHV7 355 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 SYT2Q8N9I0 419 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-211ENST00000546215 CELF4Q9BZC1 486 aaKnown RBP23.12■■□□□ 1.29
SCARB1-211ENST00000546215 OSBPL7Q9BZF2 842 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 TRPV2Q9Y5S1 764 aa23.12■■□□□ 1.29
SCARB1-211ENST00000546215 PLA2G4BP0C869 781 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 CYP11B2P19099 503 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 EPHB4P54760 987 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 SLC12A3P55017 1021 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 PPIGQ13427 754 aaKnown RBP eCLIP23.11■■□□□ 1.297e-9■□□□□ 11
SCARB1-211ENST00000546215 RESP18Q5W5W9 173 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 PANK2Q9BZ23 570 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 CDHR5Q9HBB8 845 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 SIP14410 1827 aa23.11■■□□□ 1.29
SCARB1-211ENST00000546215 LAMA2P24043 3122 aaKnown RBP23.11■■□□□ 1.29
SCARB1-211ENST00000546215 M0QZ92 97 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 CXCL10P02778 98 aa23.1■■□□□ 1.29
SCARB1-211ENST00000546215 NLRP11P59045 1033 aaKnown RBP23.1■■□□□ 1.29
SCARB1-211ENST00000546215 KIZQ2M2Z5 673 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms