RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PLS3P13797 630 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 NMT1P30419 496 aaKnown RBP21.46■■□□□ 1.03
SKP2-208ENST00000546211 ARHGAP1Q07960 439 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 KRT31Q15323 416 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 KNOP1Q1ED39 458 aaKnown RBP21.46■■□□□ 1.03
SKP2-208ENST00000546211 ZCWPW2Q504Y3 356 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 PLPPR4Q7Z2D5 763 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 ZNF720Q7Z2F6 126 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 KIFAP3Q92845 792 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 APBA2Q99767 749 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 NIFKQ9BYG3 293 aaKnown RBP21.46■■□□□ 1.03
SKP2-208ENST00000546211 KCTD10Q9H3F6 313 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 ATP6V0A4Q9HBG4 840 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 PCDHB13Q9Y5F0 798 aa21.46■■□□□ 1.03
SKP2-208ENST00000546211 CYP2B6P20813 491 aa21.45■■□□□ 1.02
SKP2-208ENST00000546211 FKBP3Q00688 224 aaKnown RBP21.45■■□□□ 1.02
SKP2-208ENST00000546211 IRF5Q13568 498 aa21.45■■□□□ 1.02
SKP2-208ENST00000546211 TMEM63BQ5T3F8 832 aa21.45■■□□□ 1.02
SKP2-208ENST00000546211 IQSEC1Q6DN90 963 aa21.45■■□□□ 1.02
SKP2-208ENST00000546211 APTXQ7Z2E3 356 aaKnown RBP21.45■■□□□ 1.02
SKP2-208ENST00000546211 IRF2BP1Q8IU81 584 aa21.45■■□□□ 1.02
SKP2-208ENST00000546211 FIZ1Q96SL8 496 aa21.45■■□□□ 1.02
SKP2-208ENST00000546211 LRRC10BA6NIK2 292 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 NKRFO15226 690 aaKnown RBP eCLIP21.44■■□□□ 1.02
SKP2-208ENST00000546211 TPM2P07951 284 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 SLC26A2P50443 739 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 POLGP54098 1239 aaPredicted RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 FCGRTP55899 365 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 ALCAMQ13740 583 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 EDRF1Q3B7T1 1238 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 SLC17A8Q8NDX2 589 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 EMID1Q96A84 441 aaPredicted RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 CNOT6LQ96LI5 555 aaKnown RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 SMARCAD1Q9H4L7 1026 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 GPRC5CQ9NQ84 441 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 PPME1Q9Y570 386 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 K7ENM7 598 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 PDXKO00764 312 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 CALUO43852 315 aaPredicted RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 COPB1P53618 953 aaKnown RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 NR1I3Q14994 352 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 DUSP28Q4G0W2 176 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 OLFML2BQ68BL8 750 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 TMC6Q7Z403 805 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 BBXQ8WY36 941 aaPredicted RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 C17orf75Q9HAS0 396 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 PDLIM7Q9NR12 457 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 TYW1Q9NV66 732 aaKnown RBP21.44■■□□□ 1.02
SKP2-208ENST00000546211 TAB2Q9NYJ8 693 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 IMPACTQ9P2X3 320 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 TRAF3IP3Q9Y228 551 aa21.44■■□□□ 1.02
SKP2-208ENST00000546211 ARID2Q68CP9 1835 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 MYH9P35579 1960 aaKnown RBP21.43■■□□□ 1.02
SKP2-208ENST00000546211 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.43■■□□□ 1.02
SKP2-208ENST00000546211 N4BP3O15049 544 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 RFC5P40937 340 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 CCDC144BQ3MJ40 725 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 ZC2HC1CQ53FD0 456 aaPredicted RBP21.43■■□□□ 1.02
SKP2-208ENST00000546211 GJC2Q5T442 439 aaPredicted RBP21.43■■□□□ 1.02
SKP2-208ENST00000546211 PPTC7Q8NI37 304 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 SLC7A3Q8WY07 619 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 EEF2KMTQ96G04 330 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 CEP63Q96MT8 703 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 INTS13Q9NVM9 706 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 FLRT1Q9NZU1 646 aa21.43■■□□□ 1.02
SKP2-208ENST00000546211 SMPD1P17405 629 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 HOXD13P35453 343 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 PSMC4P43686 418 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 MTIF2P46199 727 aaKnown RBP21.42■■□□□ 1.02
SKP2-208ENST00000546211 SMTNP53814 917 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 PEX3P56589 373 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 DMP1Q13316 513 aaPredicted RBP21.42■■□□□ 1.02
SKP2-208ENST00000546211 EMC2Q15006 297 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 LRRC55Q6ZSA7 311 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 CCDC186Q7Z3E2 898 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 FILIP1Q7Z7B0 1213 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 TRIM50Q86XT4 487 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 VSTM4Q8IW00 320 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 ATP8B4Q8TF62 1192 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 VPS16Q9H269 839 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 RTN4Q9NQC3 1192 aaKnown RBP21.42■■□□□ 1.02
SKP2-208ENST00000546211 NRBP1Q9UHY1 535 aa21.42■■□□□ 1.02
SKP2-208ENST00000546211 MARK3P27448 753 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 RTP1P59025 263 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 LACTBP83111 547 aaPredicted RBP21.41■■□□□ 1.02
SKP2-208ENST00000546211 TNFAIP2Q03169 654 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 OR6J1Q8NGC5 347 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 TUBGCP2Q9BSJ2 902 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 DHX33Q9H6R0 707 aaKnown RBP21.41■■□□□ 1.02
SKP2-208ENST00000546211 XPNPEP1Q9NQW7 623 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 KCNG1Q9UIX4 513 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 MYH11P35749 1972 aa21.41■■□□□ 1.02
SKP2-208ENST00000546211 CETN3O15182 167 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 PPP1R37O75864 691 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 GNA14O95837 355 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
SKP2-208ENST00000546211 PTGS1P23219 599 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 CTGFP29279 349 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 NCKAP1LP55160 1127 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms