RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 SDHAP31040 664 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 ETV4P43268 484 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 HSPA2P54652 639 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 KRTAP10-2P60368 255 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 ADAM17P78536 824 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 ZNF174Q15697 407 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 TKFCQ3LXA3 575 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 CNNM4Q6P4Q7 775 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 DBX2Q6ZNG2 339 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 C16orf86Q6ZW13 317 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 LARP4Q71RC2 724 aaKnown RBP eCLIP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 FILIP1Q7Z7B0 1213 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 GGNQ86UU5 652 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 TAX1BP1Q86VP1 789 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 DHX37Q8IY37 1157 aaKnown RBP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 RTKN2Q8IZC4 609 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 GIMAP8Q8ND71 665 aaPredicted RBP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 CALML6Q8TD86 181 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 APPBP2Q92624 585 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 KIAA1683Q9H0B3 1180 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 C12orf65Q9H3J6 166 aaKnown RBP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 PCIF1Q9H4Z3 704 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 SEC61A2Q9H9S3 476 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 ACSS2Q9NR19 701 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 IFT57Q9NWB7 429 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 MAGEC2Q9UBF1 373 aaPredicted RBP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 B4GALT6Q9UBX8 382 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 Q9UFV3 132 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 MAGEL2Q9UJ55 1249 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 FBXO10Q9UK96 956 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 ASB1Q9Y576 335 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 MRPL42Q9Y6G3 142 aaKnown RBP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 SMARCA4P51532 1647 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 EIF4G3O43432 1585 aaKnown RBP3.5□□□□□ -1.85
KNTC1-215ENST00000546125 TSPOAP1O95153 1857 aa3.5□□□□□ -1.85
KNTC1-215ENST00000546125 CBX4O00257 560 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 KPNA6O60684 536 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 ZNF623O75123 536 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 ZNF20P17024 532 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 SLC9A1P19634 815 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 APEX1P27695 318 aaKnown RBP3.49□□□□□ -1.85
KNTC1-215ENST00000546125 HSPA1LP34931 641 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 MEOX1P50221 254 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 STAT5BP51692 787 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 RAC3P60763 192 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 SLC6A3Q01959 620 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 PUM1Q14671 1186 aaKnown RBP eCLIP3.49□□□□□ -1.85
KNTC1-215ENST00000546125 EIF4HQ15056 248 aaKnown RBP3.49□□□□□ -1.85
KNTC1-215ENST00000546125 PCOLCEQ15113 449 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 RNF151Q2KHN1 245 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 ZXDCQ2QGD7 858 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-215ENST00000546125 ZMAT1Q5H9K5 638 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 KANK2Q63ZY3 851 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 GRAMD4Q6IC98 578 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 ZNF585AQ6P3V2 769 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 NXPE1Q8N323 547 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 SYNPOQ8N3V7 929 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 TTC9BQ8N6N2 239 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 KIAA1958Q8N8K9 716 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 FOXRED1Q96CU9 486 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-215ENST00000546125 NEIL1Q96FI4 390 aaPredicted RBP3.49□□□□□ -1.85
KNTC1-215ENST00000546125 SCYL1Q96KG9 808 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 MEGF9Q9H1U4 602 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 FAM184BQ9ULE4 1060 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 ZKSCAN5Q9Y2L8 839 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 NR2E1Q9Y466 385 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 SRCAPQ6ZRS2 3230 aa3.49□□□□□ -1.85
KNTC1-215ENST00000546125 AQRO60306 1485 aaKnown RBP eCLIP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 MAGI1Q96QZ7 1491 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 FOXS1O43638 330 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 CDC14BO60729 498 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 CDC45O75419 566 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 CYP17A1P05093 508 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 PTX3P26022 381 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 RGS3P49796 1198 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 MRE11P49959 708 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 ALDH6A1Q02252 535 aaKnown RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 TBR1Q16650 682 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 TTC38Q5R3I4 469 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 TRIM68Q6AZZ1 485 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 TCTN3Q6NUS6 607 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 RTN4RL1Q86UN2 441 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 JAZF1Q86VZ6 243 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 OR14K1Q8NGZ2 314 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 Q8TCH9 128 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 DVL3Q92997 716 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 E2F7Q96AV8 911 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 TUBGCP5Q96RT8 1024 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 ELF4Q99607 663 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 DPYSL5Q9BPU6 564 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 MTFR1LQ9H019 292 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 KLC2Q9H0B6 622 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 TOMM22Q9NS69 142 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 INTS7Q9NVH2 962 aaKnown RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 OXSMQ9NWU1 459 aa3.48□□□□□ -1.85
KNTC1-215ENST00000546125 ZFR2Q9UPR6 939 aaKnown RBP3.48□□□□□ -1.85
KNTC1-215ENST00000546125 UBA6A0AVT1 1052 aaPredicted RBP3.47□□□□□ -1.85
KNTC1-215ENST00000546125 PATE3B3GLJ2 98 aa3.47□□□□□ -1.85
KNTC1-215ENST00000546125 ARHGAP6O43182 974 aa3.47□□□□□ -1.85
KNTC1-215ENST00000546125 APOL3O95236 402 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms