RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CCDC172P0C7W6 258 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MYBP10242 640 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 VARSP26640 1264 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 PRKCIP41743 596 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 ADCY7P51828 1080 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GTF2A1P52655 376 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MRPL12P52815 198 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 RAB15P59190 212 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GNGT1P63211 74 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 DDR1Q08345 913 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 C2orf54Q08AI8 447 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GRB10Q13322 594 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 NFIL3Q16649 462 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 LETM2Q2VYF4 491 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 INTS6LQ5JSJ4 861 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 FAM26FQ5R3K3 315 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 FAM83BQ5T0W9 1011 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GPATCH4Q5T3I0 446 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 KLHDC7AQ5VTJ3 777 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 HGSNATQ68CP4 663 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CAPN12Q6ZSI9 719 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MAATS1Q7Z4T9 603 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC91Q7Z6B0 441 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 FRMD5Q7Z6J6 570 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 TRIM59Q8IWR1 403 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CNPY4Q8N129 248 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 TBCKQ8TEA7 893 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 ATP6V1G3Q96LB4 118 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 LRRC1Q9BTT6 524 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MMTAG2Q9BU76 263 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 ISCUQ9H1K1 167 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 TAF1DQ9H5J8 278 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CNOT10Q9H9A5 744 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 BLOC1S4Q9NUP1 217 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GEMIN8Q9NWZ8 242 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 NARFQ9UHQ1 456 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CAPN6Q9Y6Q1 641 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 XIRP1Q702N8 1843 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 WNK3Q9BYP7 1800 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GPR75-ASB3A0A0A6YYF3 556 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 PNMA6FA0A0J9YX94 578 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 GOLGA6L7A0A1B0GV03 622 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 FRMD3A2A2Y4 597 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 MYMKA6NI61 221 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 TMCO5BA8MYB1 307 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 ERVH48-1M5A8F1 160 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SNAP23O00161 211 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 NDUFAB1O14561 156 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 TBX3O15119 743 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 CETN3O15182 167 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 NMT2O60551 498 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SRGAP2O75044 1071 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 MOCS3O95396 460 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 FAM107AO95990 144 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 PAEPP09466 180 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SNHG28P0DPA3 235 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 MYBL2P10244 700 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 HSPA6P17066 643 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 NR1D1P20393 614 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SCTRP47872 440 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SCNN1DP51172 638 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 USP11P51784 963 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 WNT7BP56706 349 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 CYP27A1Q02318 531 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 TRAF1Q13077 416 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 RPS6KA1Q15418 735 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 ASIC2Q16515 512 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC40Q4G0X9 1142 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 TDRD12Q587J7 1177 aaKnown RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 TMC4Q7Z404 712 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SLFN12Q8IYM2 578 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 STAG2Q8N3U4 1231 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 OTUD6BQ8N6M0 293 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 PRPF38AQ8NAV1 312 aaKnown RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 USP38Q8NB14 1042 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC26Q8TAB7 109 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 ERMNQ8TAM6 284 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 MAGEC3Q8TD91 643 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SLC16A10Q8TF71 515 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SEC14L1Q92503 715 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 HPS1Q92902 700 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 CENPTQ96BT3 561 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 RUNDC3BQ96NL0 473 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 INPP4AQ96PE3 977 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SETDB2Q96T68 719 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 EYA3Q99504 573 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 FAM114A2Q9NRY5 505 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 FAM207AQ9NSI2 230 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 SUCLA2Q9P2R7 463 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 DMGDHQ9UI17 866 aaKnown RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 TRAF3IP3Q9Y228 551 aa7.07□□□□□ -1.28
SNHG1-225ENST00000545920 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 AHDC1Q5TGY3 1603 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-225ENST00000545920 ROBO1Q9Y6N7 1651 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 UBE4BO95155 1302 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms