RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FAM129AQ9BZQ8 928 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 CXorf56Q9H5V9 222 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 BCCIPQ9P287 314 aaKnown RBP eCLIP9.51□□□□□ -0.89
TDP1-204ENST00000545686 CNOT8Q9UFF9 292 aaKnown RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 ASTN1O14525 1302 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 SIPA1L1O43166 1804 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 TRIM37O94972 964 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 AKR1B1P15121 316 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 HSPA6P17066 643 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 DRD4P21917 467 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 TMOD1P28289 359 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 DRG2P55039 364 aaKnown RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 NFIXQ14938 502 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 QPCTQ16769 361 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 DCAF17Q5H9S7 520 aaPredicted RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 CYB5D1Q6P9G0 228 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 DPP8Q6V1X1 898 aaPredicted RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 SFR1Q86XK3 245 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 PARP9Q8IXQ6 854 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 FUKQ8N0W3 1084 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 CHMP6Q96FZ7 201 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 PGM2Q96G03 612 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 XPO6Q96QU8 1125 aaKnown RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 REEP2Q9BRK0 252 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 ANO3Q9BYT9 981 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 DNM3Q9UQ16 869 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 EIF3DO15371 548 aaKnown RBP eCLIP9.5□□□□□ -0.89
TDP1-204ENST00000545686 DDX3YO15523 660 aaKnown RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 AKAP3O75969 853 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 FGGP02679 453 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 GSTA1P08263 222 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 GAP43P17677 238 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 SCTRP47872 440 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 GALCP54803 685 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 HADHBP55084 474 aaKnown RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 PPATQ06203 517 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 Q4G0T1 1027 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 MFSD14BQ5SR56 506 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 DUPD1Q68J44 220 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 ETNPPLQ8TBG4 499 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 U2AF1L4Q8WU68 220 aaKnown RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 CCT6BQ92526 530 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 GJA10Q969M2 543 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 ZHX3Q9H4I2 956 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 OLFML3Q9NRN5 406 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 ZDHHC18Q9NUE0 388 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 UBE4BO95155 1302 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 CCDC169A6NNP5 214 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 DNM1LO00429 736 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 ASAP2O43150 1006 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 BUB1BO60566 1050 aaPredicted RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 SOX5P35711 763 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 DR1Q01658 176 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 ITIH4Q14624 930 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 CATSPER3Q86XQ3 398 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 OLIG1Q8TAK6 271 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 LNX1Q8TBB1 728 aaPredicted RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 NEK9Q8TD19 979 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 CTNNBL1Q8WYA6 563 aaPredicted RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 BORCS6Q96GS4 357 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 ERP44Q9BS26 406 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 SYT11Q9BT88 431 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 STK33Q9BYT3 514 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 PABPC3Q9H361 631 aaKnown RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 CCDC134Q9H6E4 229 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 MCM8Q9UJA3 840 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 RASAL2Q9UJF2 1139 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 AJAP1Q9UKB5 411 aaPredicted RBP9.5□□□□□ -0.89
TDP1-204ENST00000545686 FRMPD4Q14CM0 1322 aa9.5□□□□□ -0.89
TDP1-204ENST00000545686 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 GNPATO15228 680 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 EVI5O60447 810 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 TBCAO75347 108 aaKnown RBP9.49□□□□□ -0.89
TDP1-204ENST00000545686 UFL1O94874 794 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 RFX1P22670 979 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 SLC8A1P32418 973 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 RFC4P35249 363 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 MMP13P45452 471 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 GPSM2P81274 684 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 SLC15A2Q16348 729 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 TCERG1LQ5VWI1 586 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 ANKS4BQ8N8V4 417 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 CCDC197Q8NCU1 140 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 FAM20AQ96MK3 541 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 TMEM109Q9BVC6 243 aa9.49□□□□□ -0.89
TDP1-204ENST00000545686 CELF4Q9BZC1 486 aaKnown RBP9.49□□□□□ -0.89
TDP1-204ENST00000545686 STMN4Q9H169 189 aaPredicted RBP9.49□□□□□ -0.89
TDP1-204ENST00000545686 CD248Q9HCU0 757 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms