RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 GNAQP50148 359 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 SLC26A2P50443 739 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 FAM189BP81408 668 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 KRT17Q04695 432 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
TMEM258-208ENST00000545210 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
TMEM258-208ENST00000545210 HEATR3Q7Z4Q2 680 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 CASP10Q92851 521 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 OSMRQ99650 979 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ADAM7Q9H2U9 754 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
TMEM258-208ENST00000545210 AGO4Q9HCK5 861 aaKnown RBP13.11□□□□□ -0.31
TMEM258-208ENST00000545210 HCFC2Q9Y5Z7 792 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ZNF292O60281 2723 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 COL1A2P08123 1366 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 ZBTB42B2RXF5 422 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 PRC1O43663 620 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 HBP1O60381 514 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 CCNE2O96020 404 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 VTNP04004 478 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 GSPT1P15170 499 aaKnown RBP13.1□□□□□ -0.31
TMEM258-208ENST00000545210 PPM1AP35813 382 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 CRYBB1P53674 252 aaPredicted RBP13.1□□□□□ -0.31
TMEM258-208ENST00000545210 ITIH3Q06033 890 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 DSC3Q14574 896 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 CASC1Q6TDU7 716 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 NECTIN4Q96NY8 510 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 MFSD1Q9H3U5 465 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
TMEM258-208ENST00000545210 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 GPR32O75388 356 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 CHMLP26374 656 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 CA8P35219 290 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 AAMPQ13685 434 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
TMEM258-208ENST00000545210 CEP55Q53EZ4 464 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 FAM160B1Q5W0V3 765 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 PDXDC2PQ6P474 469 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 ABHD15Q6UXT9 468 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
TMEM258-208ENST00000545210 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 METTL13Q8N6R0 699 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 MRPL43Q8N983 215 aaKnown RBP13.09□□□□□ -0.31
TMEM258-208ENST00000545210 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
TMEM258-208ENST00000545210 LIMD1Q9UGP4 676 aa13.09□□□□□ -0.31
TMEM258-208ENST00000545210 MEIS1O00470 390 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 HOXA2O43364 376 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
TMEM258-208ENST00000545210 C22orf31O95567 290 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 CALM1P0DP23 149 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 CALM2P0DP24 149 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 CALM3P0DP25 149 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 ATP4AP20648 1035 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 MTHFRP42898 656 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
TMEM258-208ENST00000545210 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
TMEM258-208ENST00000545210 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 ERMP1Q7Z2K6 904 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
TMEM258-208ENST00000545210 CKAP2LQ8IYA6 745 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 ADSSL1Q8N142 457 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
TMEM258-208ENST00000545210 TDRD5Q8NAT2 981 aaKnown RBP13.08□□□□□ -0.32
TMEM258-208ENST00000545210 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 ZNF302Q9NR11 478 aa13.08□□□□□ -0.32
TMEM258-208ENST00000545210 SH2B2O14492 632 aaPredicted RBP13.07□□□□□ -0.32
TMEM258-208ENST00000545210 MCM5P33992 734 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 ID4P47928 161 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 CLCN5P51795 746 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 CLLU1OSQ5K130 101 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 MCTP2Q6DN12 878 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 TYW1BQ6NUM6 668 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 TMTC3Q6ZXV5 915 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 ZDHHC14Q8IZN3 488 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 SLC39A11Q8N1S5 342 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
TMEM258-208ENST00000545210 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms