RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 BFSP2Q13515 415 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 CCDC81Q6ZN84 652 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 OR8H2Q8N162 312 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 DHTKD1Q96HY7 919 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-216ENST00000545170 FAM81BQ96LP2 452 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 SLC13A1Q9BZW2 595 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 WWP1Q9H0M0 922 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 MBD2Q9UBB5 411 aa9.2□□□□□ -0.94
ATXN3-216ENST00000545170 K7ENM7 598 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 LRRN2O75325 713 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 FGFR4P22455 802 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PSMC6P62333 389 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 R3HDM1Q15032 1099 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PTGISQ16647 500 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 TAF1BQ53T94 588 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ZNF786Q8N393 782 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 QKIQ96PU8 341 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 MOV10L1Q9BXT6 1211 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ASPSCR1Q9BZE9 553 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 KCNF1Q9H3M0 494 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 HMOX2P30519 316 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PTH1RQ03431 593 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 FAM43BQ6ZT52 329 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PDIK1LQ8N165 341 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 MIEF2Q96C03 454 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 NACA2Q9H009 215 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 SPATA2Q9UM82 520 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PCDHB4Q9Y5E5 795 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 GOLGA8RI6L899 631 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PRDM1O75626 825 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 SEMA3DO95025 777 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 HSPA13P48723 471 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 NDUFA5Q16718 116 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 COPS6Q7L5N1 327 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 STKLD1Q8NE28 680 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 XPO6Q96QU8 1125 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 POLD4Q9HCU8 107 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 THOC2Q8NI27 1593 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 LAMC3Q9Y6N6 1575 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ATP1A1P05023 1023 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 DLATP10515 647 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 TARSP26639 723 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ARL4CP56559 192 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 CAV1Q03135 178 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 DCTN2Q13561 401 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ADRM1Q16186 407 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ANO4Q32M45 955 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 TNNI3KQ59H18 835 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 FAM102BQ5T8I3 360 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PPP4R4Q6NUP7 873 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 LRIG3Q6UXM1 1119 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 RTL3Q8N8U3 475 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 FPGT-TNNI3KV9GXZ4 949 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PARD3Q8TEW0 1356 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PYGMP11217 842 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 POLR2BP30876 1174 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 AKR1D1P51857 326 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PUDPQ08623 228 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 C16orf89Q6UX73 402 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 RNPC3Q96LT9 517 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ZNF219Q9P2Y4 722 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 KLHL18O94889 574 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 SEC24CP53992 1094 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PTK2Q05397 1052 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 KBTBD12Q3ZCT8 623 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 ARMCX4Q5H9R4 360 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 KCNH5Q8NCM2 988 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 MAML3Q96JK9 1138 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 PAIP1Q9H074 479 aaKnown RBP9.19□□□□□ -0.94
ATXN3-216ENST00000545170 FANCEQ9HB96 536 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 DTNAQ9Y4J8 743 aa9.19□□□□□ -0.94
ATXN3-216ENST00000545170 FAM107AO95990 144 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 SNRPA1P09661 255 aaKnown RBP9.18□□□□□ -0.94
ATXN3-216ENST00000545170 CDC27P30260 824 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 CCT3P49368 545 aaKnown RBP9.18□□□□□ -0.94
ATXN3-216ENST00000545170 CCNYQ8ND76 341 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 PDLIM2Q96JY6 352 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 MMADHCQ9H3L0 296 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-216ENST00000545170 ZSCAN32Q9NX65 697 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 FAM135AQ9P2D6 1515 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 ANO9A1A5B4 782 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 GSNP06396 782 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 AGR3Q8TD06 166 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 VPS11Q9H270 941 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 SYNGAP1Q96PV0 1343 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 CLPTM1O96005 669 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 SOX6P35712 828 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 HADHAP40939 763 aa9.18□□□□□ -0.94
ATXN3-216ENST00000545170 EIF6P56537 245 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms