RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PPME1Q9Y570 386 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 TMEM150BA6NC51 233 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 RBAK-RBAKDNI3L0D1 243 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 ENPP3O14638 875 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 GPR182O15218 404 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 YWHABP31946 246 aaKnown RBP17.61■□□□□ 0.41
CCDC78-216ENST00000544996 NLRP11P59045 1033 aaKnown RBP17.61■□□□□ 0.41
CCDC78-216ENST00000544996 CYP4A11Q02928 519 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 TAP1Q03518 808 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 NFX1Q12986 1120 aaKnown RBP17.61■□□□□ 0.41
CCDC78-216ENST00000544996 LINC01465Q8N7H1 131 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 NEK9Q8TD19 979 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 SLC7A3Q8WY07 619 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 DYDC2Q96IM9 177 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 CEP170P1Q96L14 293 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 SCLT1Q96NL6 688 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 PPP1R16BQ96T49 567 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 YME1L1Q96TA2 773 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 OSMRQ99650 979 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 EIF2AK1Q9BQI3 630 aaKnown RBP17.61■□□□□ 0.41
CCDC78-216ENST00000544996 SH2D3AQ9BRG2 576 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 CDHR5Q9HBB8 845 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 CYP26B1Q9NR63 512 aa17.61■□□□□ 0.41
CCDC78-216ENST00000544996 GPR32O75388 356 aa17.6■□□□□ 0.41
CCDC78-216ENST00000544996 MAFO75444 373 aaPredicted RBP17.6■□□□□ 0.41
CCDC78-216ENST00000544996 OR52Z1P0C646 297 aa17.6■□□□□ 0.41
CCDC78-216ENST00000544996 CTTNQ14247 550 aaKnown RBP17.6■□□□□ 0.41
CCDC78-216ENST00000544996 TMEM266Q2M3C6 531 aa17.6■□□□□ 0.41
CCDC78-216ENST00000544996 PLA2G4FQ68DD2 849 aa17.6■□□□□ 0.41
CCDC78-216ENST00000544996 TMEM60Q9H2L4 133 aa17.6■□□□□ 0.41
CCDC78-216ENST00000544996 NOC2LQ9Y3T9 749 aaKnown RBP17.6■□□□□ 0.41
CCDC78-216ENST00000544996 MYH9P35579 1960 aaKnown RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 IGKV6-21A0A0C4DH24 114 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 SLITRK3O94933 977 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 EIF4BP23588 611 aaKnown RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 POLGP54098 1239 aaPredicted RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 HTRA4P83105 476 aaPredicted RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 LARP1BQ659C4 914 aaKnown RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 TMEM40Q8WWA1 233 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 ARNTL2Q8WYA1 636 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 CEP89Q96ST8 783 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 HSD17B14Q9BPX1 270 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 TSPYL2Q9H2G4 693 aaPredicted RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 CERS4Q9HA82 394 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 WRAP73Q9P2S5 460 aaPredicted RBP17.59■□□□□ 0.41
CCDC78-216ENST00000544996 ST3GAL5Q9UNP4 418 aa17.59■□□□□ 0.41
CCDC78-216ENST00000544996 DENND3A2RUS2 1198 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 IGFBP4P22692 258 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 RFC5P40937 340 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 TECP42680 631 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 GPC3P51654 580 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 NPEPPSP55786 919 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 XKR9Q5GH70 373 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 MAFAQ8NHW3 353 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-216ENST00000544996 ERMNQ8TAM6 284 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 NLRP7Q8WX94 980 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 CCDC43Q96MW1 224 aaKnown RBP17.58■□□□□ 0.4
CCDC78-216ENST00000544996 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 ERVK-5Q9HDB9 667 aa17.58■□□□□ 0.4
CCDC78-216ENST00000544996 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-216ENST00000544996 SUCLA2Q9P2R7 463 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-216ENST00000544996 LINC01553A4QN01 128 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 POTEMA6NI47 508 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 ARHGEF15O94989 841 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 LYPLA2O95372 231 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 STAG3L1P0CL83 205 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 CUL4AQ13619 759 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 RILPL1Q5EBL4 403 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 TGS1Q96RS0 853 aaKnown RBP17.57■□□□□ 0.4
CCDC78-216ENST00000544996 GCOM2Q9BZD3 368 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-216ENST00000544996 C1orf112Q9NSG2 853 aa17.57■□□□□ 0.4
CCDC78-216ENST00000544996 LAD1O00515 517 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 GAS2O43903 313 aaKnown RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 DARSP14868 501 aaKnown RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 PDCP20941 246 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 DRP2Q13474 957 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 NBR1Q14596 966 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 FAM228AQ86W67 206 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 RHPN2Q8IUC4 686 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 TCP11Q8WWU5 503 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 LINC01599Q8WXQ3 324 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 ADAM2Q99965 735 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 RAB34Q9BZG1 259 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 DHX33Q9H6R0 707 aaKnown RBP17.56■□□□□ 0.4
CCDC78-216ENST00000544996 TUFT1Q9NNX1 390 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 ANKEF1Q9NU02 776 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 LRFN2Q9ULH4 789 aa17.56■□□□□ 0.4
CCDC78-216ENST00000544996 ZBTB39O15060 712 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 GTPBP6O43824 516 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-216ENST00000544996 XRCC6P12956 609 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC78-216ENST00000544996 ZSCAN20P17040 1043 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-216ENST00000544996 ERVK-21P61565 698 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms