RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 IFNL2Q8IZJ0 200 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 ADGRG2Q8IZP9 1017 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 RTF1Q92541 710 aaKnown RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 RPGRQ92834 1020 aaKnown RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 ZNF496Q96IT1 587 aaPredicted RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 KCNC2Q96PR1 638 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 SPATA25Q9BR10 227 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 ZDHHC5Q9C0B5 715 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 PCDH12Q9NPG4 1184 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 KCMF1Q9P0J7 381 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 ADAM29Q9UKF5 820 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 NOP58Q9Y2X3 529 aaKnown RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 NOC2LQ9Y3T9 749 aaKnown RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 A0A0G2JNJ9 132 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 K7ESF4 209 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 PRPF6O94906 941 aaKnown RBP3.26□□□□□ -1.89
YBX3-214ENST00000544501 BMP7P18075 431 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 CDK11BP21127 795 aaKnown RBP3.26□□□□□ -1.89
YBX3-214ENST00000544501 ETV4P43268 484 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 RGS3P49796 1198 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 ADCY2Q08462 1091 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 MOGSQ13724 837 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 MYBPC3Q14896 1274 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 EIF4HQ15056 248 aaKnown RBP3.26□□□□□ -1.89
YBX3-214ENST00000544501 PRAMEF9Q5VWM5 478 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 IQSEC1Q6DN90 963 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 BORAQ6PGQ7 559 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 OTOP2Q7RTS6 562 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 BMP8AQ7Z5Y6 402 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 CLRN3Q8NCR9 226 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 NUDT10Q8NFP7 164 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 RSAD2Q8WXG1 361 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 MBD6Q96DN6 1003 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 NUDT11Q96G61 164 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 MYL10Q9BUA6 226 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 MENTQ9BUN1 341 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 CARD11Q9BXL7 1154 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 FAM126AQ9BYI3 521 aaPredicted RBP3.26□□□□□ -1.89
YBX3-214ENST00000544501 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 PITHD1Q9GZP4 211 aaPredicted RBP3.26□□□□□ -1.89
YBX3-214ENST00000544501 PUS7LQ9H0K6 701 aaKnown RBP3.26□□□□□ -1.89
YBX3-214ENST00000544501 Q9UFV3 132 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 MSRAQ9UJ68 235 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 DENND2AQ9ULE3 1009 aa3.26□□□□□ -1.89
YBX3-214ENST00000544501 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
YBX3-214ENST00000544501 ALG1L2C9J202 215 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 KDM1AO60341 852 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 SESN2P58004 480 aaPredicted RBP3.25□□□□□ -1.89
YBX3-214ENST00000544501 TMPRSS15P98073 1019 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 FZD5Q13467 585 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 USP10Q14694 798 aaKnown RBP3.25□□□□□ -1.89
YBX3-214ENST00000544501 NOLC1Q14978 699 aaKnown RBP eCLIP3.25□□□□□ -1.89
YBX3-214ENST00000544501 SURF1Q15526 300 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 DGKDQ16760 1214 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 ZNF827Q17R98 1081 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 CCDC178Q5BJE1 867 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 ZFYVE27Q5T4F4 411 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 NT5DC1Q5TFE4 455 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 TRIM68Q6AZZ1 485 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 HDGFL2Q7Z4V5 671 aaPredicted RBP3.25□□□□□ -1.89
YBX3-214ENST00000544501 FRMD5Q7Z6J6 570 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 PLEKHH3Q7Z736 793 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 CXorf67Q86X51 503 aaPredicted RBP3.25□□□□□ -1.89
YBX3-214ENST00000544501 LGI4Q8N135 537 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 ACAP3Q96P50 834 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 HAPLN2Q9GZV7 340 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 POFUT1Q9H488 388 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 PARD6AQ9NPB6 346 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 USP40Q9NVE5 1235 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 SLC5A4Q9NY91 659 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 SAE1Q9UBE0 346 aaPredicted RBP3.25□□□□□ -1.89
YBX3-214ENST00000544501 RAPGEFL1Q9UHV5 662 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 SYNPO2Q9UMS6 1093 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 VWA7Q9Y334 891 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 NUMBLQ9Y6R0 609 aa3.25□□□□□ -1.89
YBX3-214ENST00000544501 MYPNQ86TC9 1320 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 A0A0A6YYJ9 748 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 ST20-MTHFSA0A0A6YYL1 179 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 ELL2O00472 640 aaPredicted RBP3.24□□□□□ -1.89
YBX3-214ENST00000544501 OPHN1O60890 802 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 PRKD3O94806 890 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 APOL3O95236 402 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 HMGCRP04035 888 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 CSF2RBP32927 897 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 ADCY8P40145 1251 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 GPR15P49685 360 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 KCNQ1P51787 676 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 FSCN1Q16658 493 aaKnown RBP3.24□□□□□ -1.89
YBX3-214ENST00000544501 ZMAT1Q5H9K5 638 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 SPOCD1Q6ZMY3 1216 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 LHFPL2Q6ZUX7 228 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 RALYLQ86SE5 291 aaKnown RBP3.24□□□□□ -1.89
YBX3-214ENST00000544501 KBTBD2Q8IY47 623 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 BCL6BQ8N143 479 aaPredicted RBP3.24□□□□□ -1.89
YBX3-214ENST00000544501 PRPF38AQ8NAV1 312 aaKnown RBP3.24□□□□□ -1.89
YBX3-214ENST00000544501 OR5AN1Q8NGI8 311 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 LPPQ93052 612 aa3.24□□□□□ -1.89
YBX3-214ENST00000544501 GFM2Q969S9 779 aaKnown RBP3.24□□□□□ -1.89
YBX3-214ENST00000544501 FERMT2Q96AC1 680 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms