RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 GBP5Q96PP8 586 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
TCF4-209ENST00000544241 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 AMFRQ9UKV5 643 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 SLC4A7Q9Y6M7 1214 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 RPS6KL1Q9Y6S9 549 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 C1orf167Q5SNV9 1468 aa11.19□□□□□ -0.62
TCF4-209ENST00000544241 MROH7Q68CQ1 1323 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 RIC1Q4ADV7 1423 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 MAGEA13PA6NCF6 341 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 DCTN3O75935 186 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 PENKP01210 267 aaPredicted RBP11.18□□□□□ -0.62
TCF4-209ENST00000544241 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
TCF4-209ENST00000544241 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
TCF4-209ENST00000544241 KCNMA1Q12791 1236 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 LCA5Q86VQ0 697 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 PPFIBP2Q8ND30 876 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 LMCD1Q9NZU5 365 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 STK17AQ9UEE5 414 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 TMCO1Q9UM00 188 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 TACC3Q9Y6A5 838 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 SMIM23A6NLE4 172 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 PEX11AO75192 247 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 FGGP02679 453 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 RARGP13631 454 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 PLTPP55058 493 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 CABP4P57796 275 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 KLRC3Q07444 240 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
TCF4-209ENST00000544241 CCDC6Q16204 474 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 GSTA3Q16772 222 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 CKAP2Q8WWK9 683 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 HES6Q96HZ4 224 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 SERPINB12Q96P63 405 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 TIPINQ9BVW5 301 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 CELF4Q9BZC1 486 aaKnown RBP11.18□□□□□ -0.62
TCF4-209ENST00000544241 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 CARD9Q9H257 536 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 EPB41L4BQ9H329 900 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 GGT7Q9UJ14 662 aa11.18□□□□□ -0.62
TCF4-209ENST00000544241 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 MAPK13O15264 365 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 ITGA4P13612 1032 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 RFC5P40937 340 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 GNAQP50148 359 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 SFSWAPQ12872 951 aaKnown RBP11.17□□□□□ -0.62
TCF4-209ENST00000544241 SF3A3Q12874 501 aaKnown RBP eCLIP11.17□□□□□ -0.62
TCF4-209ENST00000544241 STRN3Q13033 797 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 ORC2Q13416 577 aaPredicted RBP11.17□□□□□ -0.62
TCF4-209ENST00000544241 OR52E8Q6IFG1 317 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 ALKBH5Q6P6C2 394 aaKnown RBP11.17□□□□□ -0.62
TCF4-209ENST00000544241 PPP1R21Q6ZMI0 780 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 LRRC55Q6ZSA7 311 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 TRMT10CQ7L0Y3 403 aaKnown RBP11.17□□□□□ -0.62
TCF4-209ENST00000544241 FAM133AQ8N9E0 248 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 TTLL11Q8NHH1 800 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 MAGEB18Q96M61 343 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 LRRC37BQ96QE4 947 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 PLIN2Q99541 437 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 SPZ1Q9BXG8 430 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 PACSIN1Q9BY11 444 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 MIS12Q9H081 205 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 ZBTB3Q9H5J0 574 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 ATXN10Q9UBB4 475 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
TCF4-209ENST00000544241 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
TCF4-209ENST00000544241 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 NOL4O94818 638 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 CHRNA3P32297 505 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 STX2P32856 288 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 OCRLQ01968 901 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 ARID5AQ03989 594 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 MAPK7Q13164 816 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 AUHQ13825 339 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 MTFR1Q15390 333 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 ZNF365Q70YC5 407 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 DAGLBQ8NCG7 672 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 FAM136AQ96C01 138 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 IFT43Q96FT9 208 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 TGS1Q96RS0 853 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 DDX23Q9BUQ8 820 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 NKX1-2Q9UD57 310 aaPredicted RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 NAGPAQ9UK23 515 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms