RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 RFC5P40937 340 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 CLCN3P51790 818 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 POLGP54098 1239 aaPredicted RBP15.18■□□□□ 0.02
SP140-213ENST00000543928 EMC2Q15006 297 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 TPRNQ4KMQ1 711 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 RESP18Q5W5W9 173 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 CCDC155Q8N6L0 562 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 LRRC15Q8TF66 581 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 DNAJB3Q8WWF6 145 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 SLC7A3Q8WY07 619 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 PANK2Q9BZ23 570 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
SP140-213ENST00000543928 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 A0A087X0B3 334 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 IGKV6-21A0A0C4DH24 114 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
SP140-213ENST00000543928 DGAT1O75907 488 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 TIMP1P01033 207 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 CKBP12277 381 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 RAG1P15918 1043 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 ITGB8P26012 769 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 CYP2C18P33260 490 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 RBL2Q08999 1139 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 RRAGBQ5VZM2 374 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 RSPH3Q86UC2 560 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 EXOC8Q8IYI6 725 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 KIAA0319LQ8IZA0 1049 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 LINC01465Q8N7H1 131 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 PDILTQ8N807 584 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 MAP7D2Q96T17 732 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 JPH2Q9BR39 696 aaPredicted RBP15.17■□□□□ 0.02
SP140-213ENST00000543928 ATP6V0A4Q9HBG4 840 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 PDE4DIPQ5VU43 2346 aa15.17■□□□□ 0.02
SP140-213ENST00000543928 LOXHD1Q8IVV2 1947 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 CAND2O75155 1236 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 RPLP2P05387 115 aaKnown RBP15.16■□□□□ 0.02
SP140-213ENST00000543928 SSBP05455 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
SP140-213ENST00000543928 CTSHP09668 335 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 PLA2G4BP0C869 781 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 SELPP16109 830 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 CMA1P23946 247 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 TMOD1P28289 359 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 CCL23P55773 120 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 TMEM62Q0P6H9 643 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
SP140-213ENST00000543928 DRP2Q13474 957 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 ZNF618Q5T7W0 954 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 RPAINQ86UA6 219 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 RAD54LQ92698 747 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 MTRQ99707 1265 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 WNT8AQ9H1J5 351 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 XPNPEP1Q9NQW7 623 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 STK17AQ9UEE5 414 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 AKT3Q9Y243 479 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 CEP290O15078 2479 aa15.16■□□□□ 0.02
SP140-213ENST00000543928 A0A1W2PQ27 194 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 A0A1W2PQ64 194 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 A0A1W2PQD8 194 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 GAS2O43903 313 aaKnown RBP15.15■□□□□ 0.02
SP140-213ENST00000543928 VTNP04004 478 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 STAT6P42226 847 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 DNM2P50570 870 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 MRPS6P82932 125 aaKnown RBP15.15■□□□□ 0.02
SP140-213ENST00000543928 DHX8Q14562 1220 aaKnown RBP15.15■□□□□ 0.02
SP140-213ENST00000543928 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 LRRC8DQ7L1W4 858 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 MAEAQ7L5Y9 396 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 NME8Q8N427 588 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 SYT2Q8N9I0 419 aaPredicted RBP15.15■□□□□ 0.02
SP140-213ENST00000543928 LARP4BQ92615 738 aaKnown RBP15.15■□□□□ 0.02
SP140-213ENST00000543928 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 RUSC1Q9BVN2 902 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
SP140-213ENST00000543928 KCNH3Q9ULD8 1083 aa15.15■□□□□ 0.02
SP140-213ENST00000543928 A0A1B0GVL5 298 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 GOLGA6L4A6NEF3 574 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 RSPH10B2B2RC85 870 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 CHRNA1P02708 482 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 IQCF3P0C7M6 154 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 RSPH10BP0C881 870 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 PFKFB1P16118 471 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 CYP11B2P19099 503 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 MCM6Q14566 821 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 E2F4Q16254 413 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 IER5Q5VY09 327 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 MFSD5Q6N075 450 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 RINT1Q6NUQ1 792 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 TRAF7Q6Q0C0 670 aa15.14■□□□□ 0.01
SP140-213ENST00000543928 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms