RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 TMEM150BA6NC51 233 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 NLRP11P59045 1033 aaKnown RBP16.05■□□□□ 0.16
VPS37B-204ENST00000543590 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 ODR4Q5SWX8 454 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 FAM43BQ6ZT52 329 aaPredicted RBP16.05■□□□□ 0.16
VPS37B-204ENST00000543590 SLFN12Q8IYM2 578 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 CRIPAKQ8N1N5 446 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 FIBCD1Q8N539 461 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 SAMD11Q96NU1 681 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 SH2B1Q9NRF2 756 aaPredicted RBP16.05■□□□□ 0.16
VPS37B-204ENST00000543590 LMCD1Q9NZU5 365 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 ST3GAL5Q9UNP4 418 aa16.05■□□□□ 0.16
VPS37B-204ENST00000543590 COL4A4P53420 1690 aaPredicted RBP16.05■□□□□ 0.16
VPS37B-204ENST00000543590 GPR182O15218 404 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 MGEA5O60502 916 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 DGKIO75912 1065 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
VPS37B-204ENST00000543590 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
VPS37B-204ENST00000543590 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 EPC2Q52LR7 807 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 TMEM192Q8IY95 271 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 ZNF710Q8N1W2 664 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
VPS37B-204ENST00000543590 SH2D3AQ9BRG2 576 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
VPS37B-204ENST00000543590 THEGQ9P2T0 379 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
VPS37B-204ENST00000543590 WNT7AO00755 349 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 EPHA7Q15375 998 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 ANO5Q75V66 913 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 FAM228AQ86W67 206 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 C8orf76Q96K31 380 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 ADAM2Q99965 735 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 COL25A1Q9BXS0 654 aaPredicted RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 IGKV6-21A0A0C4DH24 114 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 DENND3A2RUS2 1198 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 DKC1O60832 514 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 STAG3L1P0CL83 205 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 GPC3P51654 580 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 DRP2Q13474 957 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 BTG3Q14201 252 aaPredicted RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 RABEP1Q15276 862 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 ATXN2LQ8WWM7 1075 aaKnown RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 RGS18Q9NS28 235 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 RGL1Q9NZL6 768 aa16.03■□□□□ 0.16
VPS37B-204ENST00000543590 WRAP73Q9P2S5 460 aaPredicted RBP16.03■□□□□ 0.16
VPS37B-204ENST00000543590 H3BNC9 293 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 LINC00271P0C7V0 271 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 EIF4BP23588 611 aaKnown RBP16.02■□□□□ 0.15
VPS37B-204ENST00000543590 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.15
VPS37B-204ENST00000543590 CALCRLQ16602 461 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 PLA2G4FQ68DD2 849 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 CYP26B1Q9NR63 512 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 C1orf112Q9NSG2 853 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 PCDHA12Q9UN75 941 aa16.02■□□□□ 0.15
VPS37B-204ENST00000543590 PRUNE2Q8WUY3 3088 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 C9IYK1 514 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 NEMFO60524 1076 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 MAFO75444 373 aaPredicted RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 DARSP14868 501 aaKnown RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 CTNNB1P35222 781 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 BMPR1AP36894 532 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 DNM2P50570 870 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 NPEPPSP55786 919 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 GPM6BQ13491 265 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 DSC3Q14574 896 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 TJAP1Q5JTD0 557 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 SLC24A5Q71RS6 500 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 C4orf19Q8IY42 314 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 CMTR2Q8IYT2 770 aaKnown RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 FAM184AQ8NB25 1140 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 FBXO18Q8NFZ0 1043 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 CLP1Q92989 425 aaKnown RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 DYDC2Q96IM9 177 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 ASB2Q96Q27 587 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 LXNQ9BS40 222 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
VPS37B-204ENST00000543590 PCDHB7Q9Y5E2 793 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 TRANK1O15050 2925 aa16.01■□□□□ 0.15
VPS37B-204ENST00000543590 C5orf67F2Z3F1 127 aa16■□□□□ 0.15
VPS37B-204ENST00000543590 ATP2B1P20020 1258 aa16■□□□□ 0.15
VPS37B-204ENST00000543590 CDC42EP1Q00587 391 aa16■□□□□ 0.15
VPS37B-204ENST00000543590 CYP4A11Q02928 519 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms