RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RPF1Q9H9Y2 349 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 KDM6BO15054 1643 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 EEF1B2P24534 225 aaKnown RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 CASP1P29466 404 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ALX1Q15699 326 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 LRRC23Q53EV4 343 aaPredicted RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 FSCBQ5H9T9 825 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 TMTC4Q5T4D3 741 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 NLRP14Q86W24 1093 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 TRIML2Q8N7C3 387 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ATP6V1G3Q96LB4 118 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ARHGEF37A1IGU5 675 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 CHEK2O96017 543 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 JAK3P52333 1124 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 SFR1Q86XK3 245 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 SULF1Q8IWU6 871 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 XXYLT1Q8NBI6 393 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 DCPSQ96C86 337 aaKnown RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 BEGAINQ9BUH8 593 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ZWILCHQ9H900 591 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ZFP69BQ9UJL9 534 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 APOBEC2Q9Y235 224 aaKnown RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 CEP170Q5SW79 1584 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ZBTB5O15062 677 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 PEX3P56589 373 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 COASYQ13057 564 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 TAF1BQ53T94 588 aaPredicted RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 CPSF3Q9UKF6 684 aaKnown RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 TTC26A0AVF1 554 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 KCNJ6P48051 423 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ARL13BQ3SXY8 428 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.04□□□□□ -0.16
TNC-212ENST00000542877 TMEM35BQ8NCS4 154 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 VPS39Q96JC1 886 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 G3BP2Q9UN86 482 aaKnown RBP14.04□□□□□ -0.16
TNC-212ENST00000542877 PDXDC2PQ6P474 469 aa14.04□□□□□ -0.16
TNC-212ENST00000542877 POTEMA6NI47 508 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 CYP2E1P05181 493 aaPredicted RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 IGKV5-2P06315 115 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 TAC1P20366 129 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 HOXA13P31271 388 aaPredicted RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 TRIM67Q6ZTA4 783 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 TMEM179Q6ZVK1 233 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 GUF1Q8N442 669 aaKnown RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 COG1Q8WTW3 980 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 FGD4Q96M96 766 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 EIF2AQ9BY44 585 aaKnown RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 EDEM3Q9BZQ6 932 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 KIF1BO60333 1816 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 ANKRD65E5RJM6 399 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 ZBTB24O43167 697 aaPredicted RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 TEX33O43247 280 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 PYGBP11216 843 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 GRAPQ13588 217 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 FAM47EQ6ZV65 393 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 GSPT2Q8IYD1 628 aaKnown RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 GRAPLQ8TC17 118 aaPredicted RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 NVLO15381 856 aaKnown RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 CALB1P05937 261 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 EPHA10Q5JZY3 1008 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 GIPC2Q8TF65 315 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 CYTH2Q99418 400 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 TMEM47Q9BQJ4 181 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 ANLNQ9NQW6 1124 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 CFAP73A6NFT4 308 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 KNOP1Q1ED39 458 aaKnown RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 ZC3H18Q86VM9 953 aaKnown RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 HSPH1Q92598 858 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 MAGED2Q9UNF1 606 aaPredicted RBP14.03□□□□□ -0.16
TNC-212ENST00000542877 ADGRL3Q9HAR2 1447 aa14.03□□□□□ -0.16
TNC-212ENST00000542877 ROBO2Q9HCK4 1378 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 KRT10P13645 584 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 RFX1P22670 979 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 PRELPP51888 382 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 SUSD4Q5VX71 490 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 SCARA5Q6ZMJ2 495 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 DPP9Q86TI2 863 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 ABTB1Q969K4 478 aaPredicted RBP14.02□□□□□ -0.16
TNC-212ENST00000542877 KRT82Q9NSB4 513 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 FAM8A1Q9UBU6 413 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 HAUS5O94927 633 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 OCRLQ01968 901 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 SLC12A1Q13621 1099 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 ZNF667Q5HYK9 610 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 STRIP2Q9ULQ0 834 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 PRR36Q9H6K5 1346 aa14.02□□□□□ -0.16
TNC-212ENST00000542877 GGPS1O95749 300 aa14.02□□□□□ -0.17
TNC-212ENST00000542877 EEF1DP29692 281 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms