RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 OPLAHO14841 1288 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 ADRA2BP18089 450 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 ECHS1P30084 290 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 TPCN2Q8NHX9 752 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 AKAP3O75969 853 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
CNOT9-208ENST00000542068 PON1P27169 355 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 ECE1P42892 770 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 PLTPP55058 493 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 KIRREL3Q8IZU9 778 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.262e-7■■■■□ 26.5
CNOT9-208ENST00000542068 EDEM3Q9BZQ6 932 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
CNOT9-208ENST00000542068 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 SNX24Q9Y343 169 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
CNOT9-208ENST00000542068 TAX1BP1Q86VP1 789 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 NT5C3AQ9H0P0 336 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 PLCB1Q9NQ66 1216 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
CNOT9-208ENST00000542068 DNM1LO00429 736 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 LRRN2O75325 713 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 ALDH1B1P30837 517 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 PPP2R2AP63151 447 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 GABPAQ06546 454 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 ARSHQ5FYA8 562 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 CPXCR1Q8N123 301 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 MYCT1Q8N699 235 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 FAM163AQ96GL9 167 aaPredicted RBP16.65■□□□□ 0.26
CNOT9-208ENST00000542068 SEC16BQ96JE7 1060 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 KCTD10Q9H3F6 313 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 FLOT1O75955 427 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 NDUFB10O96000 172 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 SHBGP04278 402 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 COBLL1Q53SF7 1204 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 CATSPER3Q86XQ3 398 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 TBC1D31Q96DN5 1066 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 AIPL1Q9NZN9 384 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 UTP11Q9Y3A2 253 aaKnown RBP16.65■□□□□ 0.26
CNOT9-208ENST00000542068 ESYT2A0FGR8 921 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 A6NNZ2 444 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 ECE2O60344 883 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 GALCP54803 685 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 CCDC25Q86WR0 208 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 CACNA2D3Q8IZS8 1091 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 ERMNQ8TAM6 284 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 REEP2Q9BRK0 252 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 OSBPL7Q9BZF2 842 aa16.65■□□□□ 0.26
CNOT9-208ENST00000542068 CTNND1O60716 968 aaKnown RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 CAND2O75155 1236 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 FSBPO95073 299 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 GNA14O95837 355 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 NPR1P16066 1061 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 CYP2J2P51589 502 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 CCDC38Q502W7 563 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 RUFY4Q6ZNE9 571 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 GIMAP7Q8NHV1 300 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 CERKQ8TCT0 537 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 MGARPQ8TDB4 240 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 DHX36Q9H2U1 1008 aaKnown RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 ABCB11O95342 1321 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.254e-11■■■□□ 17.4
CNOT9-208ENST00000542068 BUB1BO60566 1050 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 UBAP2Q5T6F2 1119 aaKnown RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 VPS36Q86VN1 386 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 MREGQ8N565 214 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 SYN2Q92777 582 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 PBKQ96KB5 322 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 CXorf56Q9H5V9 222 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 PPP1R9AQ9ULJ8 1098 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 PPIP5K2O43314 1243 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 FAM13AO94988 1023 aa16.64■□□□□ 0.25
CNOT9-208ENST00000542068 RPSAP08865 295 aaKnown RBP16.64■□□□□ 0.25
CNOT9-208ENST00000542068 FAM86B1E9PN63 330 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 H0YGN5 161 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 H0YIN7 160 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 C21orf2O43822 256 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 FAM86B2P0C5J1 330 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 TRIM49P0CI25 452 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 TRIM49CP0CI26 452 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 CUL1Q13616 776 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 IFI16Q16666 785 aaKnown RBP16.63■□□□□ 0.25
CNOT9-208ENST00000542068 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-208ENST00000542068 CCDC26Q8TAB7 109 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 ZKSCAN4Q969J2 545 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-208ENST00000542068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNOT9-208ENST00000542068 AMFRQ9UKV5 643 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms