RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 BRD2P25440 801 aaKnown RBP9.97□□□□□ -0.81
THBS3-211ENST00000541990 MTMR2Q13614 643 aa9.97□□□□□ -0.81
THBS3-211ENST00000541990 GLE1Q53GS7 698 aaKnown RBP9.97□□□□□ -0.81
THBS3-211ENST00000541990 DYMQ7RTS9 669 aa9.97□□□□□ -0.81
THBS3-211ENST00000541990 CABP7Q86V35 215 aa9.97□□□□□ -0.81
THBS3-211ENST00000541990 NOC3LQ8WTT2 800 aaKnown RBP9.97□□□□□ -0.81
THBS3-211ENST00000541990 SGSM3Q96HU1 749 aa9.97□□□□□ -0.81
THBS3-211ENST00000541990 NOVA2Q9UNW9 492 aaKnown RBP9.97□□□□□ -0.81
THBS3-211ENST00000541990 CCDC194A0A1B0GVG4 234 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 GRID2IPA4D2P6 1211 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 TDP2O95551 362 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 CLNS1AP54105 237 aaKnown RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 ZNF280AP59817 542 aaPredicted RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 PLCB4Q15147 1175 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 PPP2R5BQ15173 497 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 TLDC1Q6P9B6 456 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 CCDC17Q96LX7 622 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 FBXL5Q9UKA1 691 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 PCDHA1Q9Y5I3 950 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 LAMB1P07942 1786 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 BICDL2A1A5D9 508 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 A6NNZ2 444 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 GCOM1H8Y6P7 765 aaPredicted RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 M0R2N6 131 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 NEBLO76041 1014 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 MYZAPP0CAP1 466 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 MYBP10242 640 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 CTNNA1P35221 906 aaKnown RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 TUBB8Q3ZCM7 444 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 USP38Q8NB14 1042 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 TBCKQ8TEA7 893 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 MMTAG2Q9BU76 263 aaKnown RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 DDX47Q9H0S4 455 aaKnown RBP9.96□□□□□ -0.81
THBS3-211ENST00000541990 PLCB1Q9NQ66 1216 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 PCDHA4Q9UN74 947 aa9.96□□□□□ -0.81
THBS3-211ENST00000541990 SIPA1L1O43166 1804 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 A0A087X0T9 212 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 EDIL3O43854 480 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 NOL4O94818 638 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 FAM228BP0C875 321 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 ITGA4P13612 1032 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 MAGOHP61326 146 aaKnown RBP9.96□□□□□ -0.82
THBS3-211ENST00000541990 MEI1Q5TIA1 1274 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 NAIF1Q69YI7 327 aaPredicted RBP9.96□□□□□ -0.82
THBS3-211ENST00000541990 CACNA2D4Q7Z3S7 1137 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 FAM114A1Q8IWE2 563 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 CYP2W1Q8TAV3 490 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 UBLCP1Q8WVY7 318 aaPredicted RBP9.96□□□□□ -0.82
THBS3-211ENST00000541990 MAGOHBQ96A72 148 aaKnown RBP9.96□□□□□ -0.82
THBS3-211ENST00000541990 STAMBPL1Q96FJ0 436 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 CLMNQ96JQ2 1002 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 TANGO6Q9C0B7 1094 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 CCSER1Q9C0I3 900 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
THBS3-211ENST00000541990 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
THBS3-211ENST00000541990 MYMKA6NI61 221 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 TRAF5O00463 557 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 KCNK3O14649 394 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 SNHG28P0DPA3 235 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 BMP3P12645 472 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 TECP42680 631 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 ODF2Q5BJF6 829 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 UBAP2Q5T6F2 1119 aaKnown RBP9.95□□□□□ -0.82
THBS3-211ENST00000541990 CENPPQ6IPU0 288 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 TMED8Q6PL24 325 aaPredicted RBP9.95□□□□□ -0.82
THBS3-211ENST00000541990 LRRC55Q6ZSA7 311 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 HVCN1Q96D96 273 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.95□□□□□ -0.82
THBS3-211ENST00000541990 CELF4Q9BZC1 486 aaKnown RBP9.95□□□□□ -0.82
THBS3-211ENST00000541990 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 ATRNL1Q5VV63 1379 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
THBS3-211ENST00000541990 SLC37A4O43826 429 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 NOVP48745 357 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 HMGCS2P54868 508 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 MAN2A1Q16706 1144 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 GRIPAP1Q4V328 841 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 MAP1SQ66K74 1059 aaPredicted RBP9.95□□□□□ -0.82
THBS3-211ENST00000541990 TATDN2Q93075 761 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 FGFBP2Q9BYJ0 223 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 ISCUQ9H1K1 167 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 ADAMTS1Q9UHI8 967 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 L3MBTL1Q9Y468 752 aa9.95□□□□□ -0.82
THBS3-211ENST00000541990 FER1L6Q2WGJ9 1857 aa9.94□□□□□ -0.82
THBS3-211ENST00000541990 ZNF646O15015 1829 aaPredicted RBP9.94□□□□□ -0.82
THBS3-211ENST00000541990 GOLGA6L10A6NI86 522 aa9.94□□□□□ -0.82
THBS3-211ENST00000541990 DAPK3O43293 454 aa9.94□□□□□ -0.82
THBS3-211ENST00000541990 CFBP00751 764 aa9.94□□□□□ -0.82
THBS3-211ENST00000541990 DRD4P21917 467 aa9.94□□□□□ -0.82
THBS3-211ENST00000541990 GNAQP50148 359 aa9.94□□□□□ -0.82
THBS3-211ENST00000541990 MRPL12P52815 198 aaKnown RBP9.94□□□□□ -0.82
THBS3-211ENST00000541990 POLR2FP61218 127 aaKnown RBP9.94□□□□□ -0.82
THBS3-211ENST00000541990 PPP2R2AP63151 447 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms