RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PLPPR2Q96GM1 343 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 SPAG5Q96R06 1193 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 CELF4Q9BZC1 486 aaKnown RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 DBNDD1Q9H9R9 158 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 ITM2CQ9NQX7 267 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 CCM2LQ9NUG4 571 aaPredicted RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 WHRNQ9P202 907 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 KCNH4Q9UQ05 1017 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
DDB1-219ENST00000541513 COL16A1Q07092 1604 aaPredicted RBP6.32□□□□□ -1.4
DDB1-219ENST00000541513 DISP3Q9P2K9 1392 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 MON2Q7Z3U7 1717 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 TRPM3Q9HCF6 1732 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 GOLGA6L6A8MZA4 724 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 CHURC1-FNTBB4DL54 471 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 TNFRSF10AO00220 468 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 FOXN3O00409 490 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 PPFIA3O75145 1194 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 PPM1BO75688 479 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 GSTP1P09211 210 aaKnown RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 RPL17P18621 184 aaKnown RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 RPIAP49247 311 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 BPIFB3P59826 476 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 FOXO1Q12778 655 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 SMC1AQ14683 1233 aaKnown RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 POLD3Q15054 466 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 ACAP2Q15057 778 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ANO4Q32M45 955 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 RILPL1Q5EBL4 403 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 BROXQ5VW32 411 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 MAP1SQ66K74 1059 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 TMCO3Q6UWJ1 677 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 CYFIP1Q7L576 1253 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 HDXQ7Z353 690 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 PRR18Q8N4B5 295 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ESX1Q8N693 406 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 OTUD6BQ8N6M0 293 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ZMIZ2Q8NF64 920 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 LRTOMTQ8WZ04 291 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 LTV1Q96GA3 475 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 HIC2Q96JB3 615 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 FGD4Q96M96 766 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ZFYVE21Q9BQ24 234 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ZCCHC2Q9C0B9 1178 aaKnown RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 TSPY26PQ9H489 355 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 BRD9Q9H8M2 597 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ZNF277Q9NRM2 450 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 PLSCR4Q9NRQ2 329 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 ATP8A2Q9NTI2 1148 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 GGA3Q9NZ52 723 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 STAP2Q9UGK3 403 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 KLHL3Q9UH77 587 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 PCDHA4Q9UN74 947 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 GPR34Q9UPC5 381 aa6.31□□□□□ -1.4
DDB1-219ENST00000541513 POLR3AO14802 1390 aaPredicted RBP6.31□□□□□ -1.4
DDB1-219ENST00000541513 PXDNQ92626 1479 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 A0A1B0GTH6 734 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 FSD2A1L4K1 749 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 CAPN8A6NHC0 703 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 RHPN2P1A8MT19 583 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 RGS13O14921 159 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 IRAK2O43187 625 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 TGM5O43548 720 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 NCK2O43639 380 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 MGEA5O60502 916 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 TP53P04637 393 aaPredicted RBP6.3□□□□□ -1.4
DDB1-219ENST00000541513 CKMP06732 381 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 GYS1P13807 737 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 PTPRAP18433 802 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 ITGA6P23229 1130 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 PDIA3P30101 505 aaKnown RBP6.3□□□□□ -1.4
DDB1-219ENST00000541513 HOXC12P31275 282 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 COPAP53621 1224 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 SCAND1P57086 179 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 RELBQ01201 579 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 GUCY1A3Q02108 690 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 PRKG1Q13976 671 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 SPARCL1Q14515 664 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 INPP5AQ14642 412 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 PLCB4Q15147 1175 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 SLC14A2Q15849 920 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 HSF5Q4G112 596 aaPredicted RBP6.3□□□□□ -1.4
DDB1-219ENST00000541513 ANO6Q4KMQ2 910 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 TMEM177Q53S58 311 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 FAM209BQ5JX69 171 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 ZNF697Q5TEC3 545 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 NPNTQ6UXI9 565 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 USP45Q70EL2 814 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 ENOSF1Q7L5Y1 443 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 KRT74Q7RTS7 529 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
DDB1-219ENST00000541513 NRSN1Q8IZ57 195 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
DDB1-219ENST00000541513 CAMKK1Q8N5S9 505 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms