RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 A0A1W2PQC6 194 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 ESYT3A0FGR9 886 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 RASSF10A6NK89 507 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 PDHXO00330 501 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 CKAP4Q07065 602 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 IFT88Q13099 833 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 CALCRLQ16602 461 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 SWT1Q5T5J6 900 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 KIAA0895Q8NCT3 520 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 EHBP1Q8NDI1 1231 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 SNX29Q8TEQ0 813 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 SEMA6BQ9H3T3 888 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 CPA4Q9UI42 421 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 MEIS2O14770 477 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 ZNF263O14978 683 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 TACC1O75410 805 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 TOMM70O94826 608 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 GFPT1Q06210 699 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 KCNB1Q14721 858 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 IL31RAQ8NI17 732 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 LRRC1Q9BTT6 524 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 MYMKA6NI61 221 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 LRRC53A6NM62 1247 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 GNA11P29992 359 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 MAGEA1P43355 309 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 COG2Q14746 738 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 CCDC40Q4G0X9 1142 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 CNNM4Q6P4Q7 775 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 RASAL3Q86YV0 1011 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 MTMR8Q96EF0 704 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 NUDT12Q9BQG2 462 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 NDST4Q9H3R1 872 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 ZNF214Q9UL59 606 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 CPP00450 1065 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 HPDP32754 393 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 KIF11P52732 1056 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 KRT25Q7Z3Z0 450 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 CHURC1Q8WUH1 139 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 SLC38A10Q9HBR0 1119 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 FEM1BQ9UK73 627 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 CTDP1Q9Y5B0 961 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 PCDHA13Q9Y5I0 950 aa15.67■□□□□ 0.1
SFSWAP-210ENST00000541286 FECHP22830 423 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 CNTN2Q02246 1040 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 PPIL2Q13356 520 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 EEPD1Q7L9B9 569 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 NCAPG2Q86XI2 1143 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 TSEN2Q8NCE0 465 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 IFT81Q8WYA0 676 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 MS4A14Q96JA4 679 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 BCAS3Q9H6U6 928 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 RLFQ13129 1914 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 DSG3P32926 999 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 ADCY7P51828 1080 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 SMC1BQ8NDV3 1235 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 LPAR1Q92633 364 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 CABS1Q96KC9 395 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 RUFY1Q96T51 708 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 NUP58Q9BVL2 599 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 RANBP17Q9H2T7 1088 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 SH3GLB2Q9NR46 395 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 ARHGAP20Q9P2F6 1191 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 EIF4E1BA6NMX2 242 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■□□□ 11.9
SFSWAP-210ENST00000541286 SLC37A4O43826 429 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 CDC25CP30307 473 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 VAV2P52735 878 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 MIIPQ5JXC2 388 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 BTNL9Q6UXG8 535 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 CCNI2Q6ZMN8 369 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 DNAAF5Q86Y56 855 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 ZMYND12Q9H0C1 365 aa15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 PPANQ9NQ55 473 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 PACSIN2Q9UNF0 486 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-210ENST00000541286 GUCY2FP51841 1108 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 CAP1Q01518 475 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 SNAPC2Q13487 334 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 RGMBQ6NW40 437 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 WDR93Q6P2C0 686 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 TELO2Q9Y4R8 837 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 ZSCAN5CA6NGD5 496 aaPredicted RBP15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 EIF2AK2P19525 551 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 VWA3BQ502W6 1294 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 CLEC4DQ8WXI8 215 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 LARP4BQ92615 738 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 GRIN2DO15399 1336 aa15.65■□□□□ 0.1
SFSWAP-210ENST00000541286 C19orf81C9J6K1 198 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 KRT18P05783 430 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 TUBB4BP68371 445 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 TTMPQ5BVD1 217 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 MMTAG2Q9BU76 263 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 RNF146Q9NTX7 359 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 KCNH4Q9UQ05 1017 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 RANBP2P49792 3224 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms