RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SGSM3Q96HU1 749 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 GSTA4O15217 222 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ZBED1O96006 694 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 HNRNPCP07910 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 DYNLT1P63172 113 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 PTGISQ16647 500 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 WDR93Q6P2C0 686 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ADD3Q9UEY8 706 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 CNOT8Q9UFF9 292 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 TRAF3IP3Q9Y228 551 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ESYT2A0FGR8 921 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 PPP1R12AO14974 1030 aaPredicted RBP16■□□□□ 0.15
SMARCA4-207ENST00000541122 TCP10Q12799 353 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 IFRD2Q12894 506 aaPredicted RBP16■□□□□ 0.15
SMARCA4-207ENST00000541122 TRPM8Q7Z2W7 1104 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 GLG1Q92896 1179 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 CALN1Q9BXU9 219 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 WWP1Q9H0M0 922 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 CCT8L1PA6NM43 557 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 FUT8Q9BYC5 575 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 GJB4Q9NTQ9 266 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 CCDC137Q6PK04 289 aaKnown RBP16■□□□□ 0.15
SMARCA4-207ENST00000541122 SGMS1Q86VZ5 419 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 ANAPC7Q9UJX3 599 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 KIF1BO60333 1816 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 PLEKHA8P1O95397 391 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 ATP2C1P98194 919 aaPredicted RBP16■□□□□ 0.15
SMARCA4-207ENST00000541122 SURF1Q15526 300 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 SH2D3CQ8N5H7 860 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 LY9Q9HBG7 655 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 PIH1D3Q9NQM4 214 aaKnown RBP16■□□□□ 0.15
SMARCA4-207ENST00000541122 TRPC5Q9UL62 973 aaPredicted RBP16■□□□□ 0.15
SMARCA4-207ENST00000541122 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 USP6P35125 1406 aa16■□□□□ 0.15
SMARCA4-207ENST00000541122 PRPSAP2O60256 369 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 KDM7AQ6ZMT4 941 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 TBC1D10CQ8IV04 446 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 DNAAF3Q8N9W5 541 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 ATP11CQ8NB49 1132 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 HIPK4Q8NE63 616 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 TTC1Q99614 292 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 IRX2Q9BZI1 471 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■■■ 29.3
SMARCA4-207ENST00000541122 TCP11X1B4DZS4 312 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 NR3C1P04150 777 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 SRGNP10124 158 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 CHN1P15882 459 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 HDAC4P56524 1084 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 TFDP2Q14188 446 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 ANKFY1Q9P2R3 1169 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 FBXO2Q9UK22 296 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 PAIP2BQ9ULR5 123 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 TFDP1Q14186 410 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 DNAL1Q4LDG9 190 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 TAF1BQ53T94 588 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 ZNF804BA4D1E1 1349 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 CASP1P29466 404 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 CEP19Q96LK0 163 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 PCIF1Q9H4Z3 704 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-207ENST00000541122 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 H7C1W4 665 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 NVLO15381 856 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 MYBL1P10243 752 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 IL1RL1Q01638 556 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 AP3B2Q13367 1082 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 DNAJC9Q8WXX5 260 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 PRMT1Q99873 361 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 SMYD3Q9H7B4 428 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 DCTN4Q9UJW0 460 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 PGM1P36871 562 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 GTF2IP78347 998 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 THOC5Q13769 683 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 LRRC14Q15048 493 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 KIAA1755Q5JYT7 1200 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 FAM160B1Q5W0V3 765 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 KLC3Q6P597 504 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 ROPN1BQ9BZX4 212 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 ROPN1Q9HAT0 212 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 KRT82Q9NSB4 513 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 ZFXP17010 805 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 COASYQ13057 564 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 LLGL1Q15334 1064 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 DAB2IPQ5VWQ8 1189 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 PPP1R18Q6NYC8 613 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 LRRC31Q6UY01 552 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 RAD9BQ6WBX8 426 aa15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 ZNF564Q8TBZ8 553 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-207ENST00000541122 FAF2Q96CS3 445 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms