RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TLCD1Q96CP7 247 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 GBP5Q96PP8 586 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 TIPINQ9BVW5 301 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 LRRC4CQ9HCJ2 640 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 AGPAT5Q9NUQ2 364 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 ZNHIT6Q9NWK9 470 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 PNMA3Q9UL41 463 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 PNMA2Q9UL42 364 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 RAD51CO43502 376 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 LDHBP07195 334 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 CACNA2D1P54289 1103 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 SPA17Q15506 151 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 CNPY1Q3B7I2 92 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 ZBTB8BQ8NAP8 495 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 ASAP3Q8TDY4 903 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 LZICQ8WZA0 190 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 CORO1BQ9BR76 489 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 ISCUQ9H1K1 167 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 THAP9Q9H5L6 903 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 TMEM98Q9Y2Y6 226 aa10.27□□□□□ -0.77
CTNNA1-243ENST00000540387 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 hCG_2014768A0A024R1R8 64 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 NFKBIEO00221 500 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 HNRNPRO43390 633 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SNX3O60493 162 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 GNA14O95837 355 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 PTDSS1P48651 473 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 NLRP5P59047 1200 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 ZNF365Q70YC5 407 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 LARGE2Q8N3Y3 721 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 KCNN1Q92952 543 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 DSCC1Q9BVC3 393 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 CYP39A1Q9NYL5 469 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 KIAA1551Q9HCM1 1747 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 YDJCA8MPS7 323 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 CETN3O15182 167 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SPATA31D3P0C874 917 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 DIXDC1Q155Q3 683 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 MUM1Q2TAK8 710 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SPTY2D1Q68D10 685 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SPATA31D4Q6ZUB0 917 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 CERS5Q8N5B7 392 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 RETREG2Q8NC44 543 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 UTP4Q969X6 686 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 SELENOSQ9BQE4 189 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 MTA3Q9BTC8 594 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 ARMT1Q9H993 441 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 TMOD4Q9NZQ9 345 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 CTTNBP2NLQ9P2B4 639 aa10.26□□□□□ -0.77
CTNNA1-243ENST00000540387 A0A1W2PQC6 194 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 FOXP2O15409 715 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 OAS1P00973 400 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 MYBP10242 640 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 PLOD1Q02809 727 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 LSAMPQ13449 338 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 DZIP1Q86YF9 867 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 PIGOQ8TEQ8 1089 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 PAGE5Q96GU1 130 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 GSDMAQ96QA5 445 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 STRBPQ96SI9 672 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 NSRP1Q9H0G5 558 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 TAOK3Q9H2K8 898 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 RNF14Q9UBS8 474 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 PAIP2BQ9ULR5 123 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 USP15Q9Y4E8 981 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 PCDHA13Q9Y5I0 950 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 DLEC1Q9Y238 1755 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 A0A087X0B3 334 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 FLT3P36888 993 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 TOB1P50616 345 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 DYNLL1P63167 89 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 MTMR3Q13615 1198 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 RCN2Q14257 317 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 P3H1Q32P28 736 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 KBTBD12Q3ZCT8 623 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 DDX42Q86XP3 938 aaKnown RBP eCLIP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 LCORLQ8N3X6 602 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 EIF1ADQ8N9N8 165 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 RBBP8NLQ8NC74 664 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 SPIRE2Q8WWL2 714 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 ZNF333Q96JL9 665 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 RAB3IPQ96QF0 476 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 NUDCD1Q96RS6 583 aa10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 DDX23Q9BUQ8 820 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-243ENST00000540387 BRD8Q9H0E9 1235 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms