RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PTGDRQ13258 359 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 ACCSLQ4AC99 568 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 CSGALNACT2Q8N6G5 542 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 PIK3R5Q8WYR1 880 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 FERMT2Q96AC1 680 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 PAGE5Q96GU1 130 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 MAP3K14Q99558 947 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 IDI2Q9BXS1 227 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
DDB1-217ENST00000540166 CHCHD3Q9NX63 227 aaKnown RBP9.44□□□□□ -0.9
DDB1-217ENST00000540166 FBXO2Q9UK22 296 aaPredicted RBP9.44□□□□□ -0.9
DDB1-217ENST00000540166 KDM3BQ7LBC6 1761 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 WDR19Q8NEZ3 1342 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 IGF2BP3O00425 579 aaKnown RBP eCLIP9.43□□□□□ -0.9
DDB1-217ENST00000540166 PDHA1P08559 390 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 GNAT1P11488 350 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 RGS2P41220 211 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 MAGOHP61326 146 aaKnown RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 SEPT2Q15019 361 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 BZW1Q7L1Q6 419 aaKnown RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 ANKRD35Q8N283 1001 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 MAGOHBQ96A72 148 aaKnown RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 CHMP6Q96FZ7 201 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 ELAC2Q9BQ52 826 aaKnown RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 CNOT10Q9H9A5 744 aaKnown RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 CCT8L1PA6NM43 557 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 FERP16591 822 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 IFNAR2P48551 515 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 FLT3LGP49771 235 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 CUL3Q13618 768 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 MUM1Q2TAK8 710 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 C3orf20Q8ND61 904 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 GINM1Q9NU53 330 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 PTCH2Q9Y6C5 1203 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 SCN4AP35499 1836 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 FARP2O94887 1054 aaPredicted RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 ATP2A2P16615 1042 aaKnown RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 MB21D1Q8N884 522 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 SLAIN1Q8ND83 568 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 MIPOL1Q8TD10 442 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 DEFB118Q96PH6 123 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 STMN4Q9H169 189 aaPredicted RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 KANSL2Q9H9L4 492 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 PRDM5Q9NQX1 630 aaPredicted RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 RNF14Q9UBS8 474 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 ZBTB21Q9ULJ3 1066 aa9.43□□□□□ -0.9
DDB1-217ENST00000540166 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.43□□□□□ -0.9
DDB1-217ENST00000540166 TNKSO95271 1327 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 TTC36A6NLP5 189 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 MAPK4P31152 587 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 ELF3P78545 371 aaPredicted RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 GRIK3Q13003 919 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 TMEM179Q6ZVK1 233 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 CAVIN3Q969G5 261 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 GBP5Q96PP8 586 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 TRIM31Q9BZY9 425 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 MLXIPQ9HAP2 919 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 INTS9Q9NV88 658 aaKnown RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 ARPP21Q9UBL0 812 aaPredicted RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 RWDD2AQ9UIY3 292 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 AGTPBP1Q9UPW5 1226 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 SH3BP1Q9Y3L3 701 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 SNCAIPQ9Y6H5 919 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 EME2A4GXA9 379 aaPredicted RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 CETN3O15182 167 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 CEP104O60308 925 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 CCND1P24385 295 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 RPS6KA3P51812 740 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 BACE1P56817 501 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 ZBED6P86452 979 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 PRPF4BQ13523 1007 aaKnown RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 FBXL16Q8N461 479 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 HOMER2Q9NSB8 354 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 NOD1Q9Y239 953 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 KBTBD13C9JR72 458 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 CREB3O43889 395 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 SLC1A4P43007 532 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 RASIP1Q5U651 963 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 B4GALNT2Q8NHY0 566 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 RAB3IPQ96QF0 476 aaPredicted RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 FAM207AQ9NSI2 230 aaPredicted RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 FAM198AQ9UFP1 575 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 SRRDQ9UH36 339 aa9.42□□□□□ -0.9
DDB1-217ENST00000540166 LIMA1Q9UHB6 759 aaKnown RBP9.42□□□□□ -0.9
DDB1-217ENST00000540166 RGS16O15492 202 aaPredicted RBP9.41□□□□□ -0.9
DDB1-217ENST00000540166 SETDB1Q15047 1291 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 PLEKHH3Q7Z736 793 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 VSIG1Q86XK7 387 aa9.41□□□□□ -0.9
DDB1-217ENST00000540166 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms