RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NENFQ9UMX5 172 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 BCS1LQ9Y276 419 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 L3MBTL1Q9Y468 752 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 PCDHB13Q9Y5F0 798 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 MGRN1O60291 552 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 PPFIA2O75334 1257 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 CLTAP09496 248 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 DDB1Q16531 1140 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 FOXR2Q6PJQ5 311 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 C3orf20Q8ND61 904 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 MIEF2Q96C03 454 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 ARHGEF26Q96DR7 871 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 ZDHHC18Q9NUE0 388 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 ATP6V1G2O95670 118 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 MMP14P50281 582 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 PPP4CP60510 307 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 PICALMQ13492 652 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC29A2Q14542 456 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 C10orf76Q5T2E6 689 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 PNMA8AQ86V59 439 aaPredicted RBP15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 CCDC197Q8NCU1 140 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 ATXN2LQ8WWM7 1075 aaKnown RBP15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 STAMBPL1Q96FJ0 436 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 NOD2Q9HC29 1040 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 SRCAPQ6ZRS2 3230 aa15.13■□□□□ 0.01
SCNN1A-215ENST00000540037 DDX3YO15523 660 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 EVI5O60447 810 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 AKR1B1P15121 316 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 PAX7P23759 505 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 DR1Q01658 176 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC10A5Q5PT55 438 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC30A10Q6XR72 485 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 ZC3H3Q8IXZ2 948 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 ALG3Q92685 438 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 C18orf8Q96DM3 657 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 REEP2Q9BRK0 252 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 SEMA4AQ9H3S1 761 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 FAM114A2Q9NRY5 505 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 AMFRQ9UKV5 643 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 AGAP1Q9UPQ3 857 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 MAST2Q6P0Q8 1798 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 FOXO6A8MYZ6 492 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 RAD21O60216 631 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 SKAP2O75563 359 aaPredicted RBP15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 PRKCIP41743 596 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 CLK2P49760 499 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 JAM2P57087 298 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 GIT2Q14161 759 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 SEPT2Q15019 361 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 KSR1Q8IVT5 923 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC35C1Q96A29 364 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 KDM4CQ9H3R0 1056 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 ABCF3Q9NUQ8 709 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 MTMR4Q9NYA4 1195 aa15.12■□□□□ 0.01
SCNN1A-215ENST00000540037 FGFR4P22455 802 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 PMS2P54278 862 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 KLRC3Q07444 240 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 LLGL1Q15334 1064 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 KNOP1Q1ED39 458 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 EDRF1Q3B7T1 1238 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 CATSPER3Q86XQ3 398 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 CCDC113Q9H0I3 377 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 NT5C3AQ9H0P0 336 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 SEPT11Q9NVA2 429 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 BZW2Q9Y6E2 419 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 ZNF335Q9H4Z2 1342 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 DNAJC8O75937 253 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 EZRP15311 586 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 CDC25CP30307 473 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 DUPD1Q68J44 220 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 ZDHHC24Q6UX98 284 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 DPP8Q6V1X1 898 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 ERP44Q9BS26 406 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 ZNF287Q9HBT7 754 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 VIMP08670 466 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 CHRM1P11229 460 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 KRT13P13646 458 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 TAL1P17542 331 aaPredicted RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 MARCKSL1P49006 195 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 CLNS1AP54105 237 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 PTENP60484 403 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 CYP4A11Q02928 519 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 LRRC14Q15048 493 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 HYIQ5T013 277 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 PTF1AQ7RTS3 328 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 THOC1Q96FV9 657 aaKnown RBP15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 PSTPIP2Q9H939 334 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 DBR1Q9UK59 544 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms