RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CASD1Q96PB1 797 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 LY9Q9HBG7 655 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 SPG21Q9NZD8 308 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 CDH22Q9UJ99 828 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
CLSTN3-209ENST00000539982 C2orf71A6NGG8 1288 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 IGHDP01880 384 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 COL1A2P08123 1366 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 ID4P47928 161 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 ITGB3BPQ13352 177 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 ZNF484Q5JVG2 852 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 MCTP2Q6DN12 878 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 ZDHHC14Q8IZN3 488 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 ADSSL1Q8N142 457 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 CMTR1Q8N1G2 835 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 MTA3Q9BTC8 594 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 MFSD1Q9H3U5 465 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 AGO4Q9HCK5 861 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 DMDP11532 3685 aa13.26□□□□□ -0.29
CLSTN3-209ENST00000539982 BACH1O14867 736 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 CLASP2O75122 1294 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 ASGR2P07307 311 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 ATAT1Q5SQI0 421 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 ABHD15Q6UXT9 468 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 ABI1Q8IZP0 508 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 OSMRQ99650 979 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 LIMD1Q9UGP4 676 aa13.25□□□□□ -0.29
CLSTN3-209ENST00000539982 VPS13AQ96RL7 3174 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 ZBTB42B2RXF5 422 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 MEIS1O00470 390 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 GPR32O75388 356 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 CCNE2O96020 404 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 CALM1P0DP23 149 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 CALM2P0DP24 149 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 CALM3P0DP25 149 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 PBX3P40426 434 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 NFXL1Q6ZNB6 911 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 TEX2Q8IWB9 1127 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 ZNF302Q9NR11 478 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 USTQ9Y2C2 406 aa13.24□□□□□ -0.29
CLSTN3-209ENST00000539982 WDR87Q6ZQQ6 2873 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 C22orf31O95567 290 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 CXCL14O95715 111 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 VTNP04004 478 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 WEE2P0C1S8 567 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 ATP4AP20648 1035 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 RARS2Q5T160 578 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 KIAA1841Q6NSI8 718 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 PDXDC2PQ6P474 469 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 HEATR3Q7Z4Q2 680 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 C12orf76Q8N812 135 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 DBR1Q9UK59 544 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 DCHS1Q96JQ0 3298 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 EVPLQ92817 2033 aa13.23□□□□□ -0.29
CLSTN3-209ENST00000539982 GVINP1Q7Z2Y8 2422 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 PRC1O43663 620 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 RXRAP19793 462 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 AOC1P19801 751 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 CHMLP26374 656 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 TMEM87BQ96K49 555 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 RIC8AQ9NPQ8 531 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 DZANK1Q9NVP4 752 aa13.22□□□□□ -0.29
CLSTN3-209ENST00000539982 ZNF292O60281 2723 aa13.21□□□□□ -0.29
CLSTN3-209ENST00000539982 SH2B2O14492 632 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-209ENST00000539982 MAGEB2O15479 319 aa13.21□□□□□ -0.29
CLSTN3-209ENST00000539982 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms