RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 VTNP04004 478 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 GHRP10912 638 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 CCT6AP40227 531 aaKnown RBP15□□□□□ -0.01
PRPF19-204ENST00000539960 RFC5P40937 340 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 LPIN1Q14693 890 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 USP38Q8NB14 1042 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 SLC7A3Q8WY07 619 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 MAP7D2Q96T17 732 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 DHX33Q9H6R0 707 aaKnown RBP15□□□□□ -0.01
PRPF19-204ENST00000539960 AKT3Q9Y243 479 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 SLC4A7Q9Y6M7 1214 aa15□□□□□ -0.01
PRPF19-204ENST00000539960 VWA3AA6NCI4 1184 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 PP2D1A8MPX8 630 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 ZBBXA8MT70 800 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 SOX1O00570 391 aaPredicted RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 ZSCAN22P10073 491 aaPredicted RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 CDC25AP30304 524 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 FXR1P51114 621 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 CRYBB1P53674 252 aaPredicted RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 NLRP11P59045 1033 aaKnown RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 CDC42EP1Q00587 391 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 DRP2Q13474 957 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 PTPAQ15257 358 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 KIZQ2M2Z5 673 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 KRT79Q5XKE5 535 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 HAUS3Q68CZ6 603 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 TSHZ1Q6ZSZ6 1077 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 MMTAG2Q9BU76 263 aaKnown RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 IFIH1Q9BYX4 1025 aaKnown RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 ADAMTS10Q9H324 1103 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 AGO3Q9H9G7 860 aaKnown RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 SUCLA2Q9P2R7 463 aaPredicted RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 DBR1Q9UK59 544 aaKnown RBP14.99□□□□□ -0.01
PRPF19-204ENST00000539960 GINS2Q9Y248 185 aa14.99□□□□□ -0.01
PRPF19-204ENST00000539960 EFCAB14O75071 495 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 RARRES1P49788 294 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 POLGP54098 1239 aaPredicted RBP14.98□□□□□ -0.01
PRPF19-204ENST00000539960 SMAD3P84022 425 aaKnown RBP14.98□□□□□ -0.01
PRPF19-204ENST00000539960 PKP1Q13835 747 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 ECM1Q16610 540 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 FOXD4L5Q5VV16 416 aaPredicted RBP14.98□□□□□ -0.01
PRPF19-204ENST00000539960 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
PRPF19-204ENST00000539960 POTEGQ6S5H5 508 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 PHOSPHO2Q8TCD6 241 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 SNX29Q8TEQ0 813 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 FOXD4L4Q8WXT5 416 aaPredicted RBP14.98□□□□□ -0.01
PRPF19-204ENST00000539960 APBB2Q92870 758 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 USP28Q96RU2 1077 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 PPP1R16BQ96T49 567 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 KIAA1024Q9UPX6 916 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 SCN5AQ14524 2016 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 WDR81Q562E7 1941 aa14.98□□□□□ -0.01
PRPF19-204ENST00000539960 GRXCR1A8MXD5 290 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 GAS2O43903 313 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 DGAT1O75907 488 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 ATP2A2P16615 1042 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 CD52P31358 61 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 KCNJ6P48051 423 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 WDR5P61964 334 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 CEBPZQ03701 1054 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 SLC39A14Q15043 492 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 TET1Q8NFU7 2136 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 PRPF31Q8WWY3 499 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 TMEM143Q96AN5 459 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 LRCH3Q96II8 777 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 AK8Q96MA6 479 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 ZNF396Q96N95 335 aaPredicted RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 TFIP11Q9UBB9 837 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 PADI3Q9ULW8 664 aa14.97□□□□□ -0.01
PRPF19-204ENST00000539960 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
PRPF19-204ENST00000539960 RPS6KA5O75582 802 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 F13A1P00488 732 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 EIF4BP23588 611 aaKnown RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 MARCKSP29966 332 aaPredicted RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 GPC3P51654 580 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 EMC2Q15006 297 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 FAM43BQ6ZT52 329 aaPredicted RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 TMEM40Q8WWA1 233 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 TCP11Q8WWU5 503 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 CCDC43Q96MW1 224 aaKnown RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 SLC9A7Q96T83 725 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 OSMRQ99650 979 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 MTRQ99707 1265 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 XPNPEP1Q9NQW7 623 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 DDX19AQ9NUU7 478 aaKnown RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 DNM3Q9UQ16 869 aa14.96□□□□□ -0.01
PRPF19-204ENST00000539960 SRPRBQ9Y5M8 271 aaKnown RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.01
PRPF19-204ENST00000539960 ARHGEF35A5YM69 484 aa14.95□□□□□ -0.02
PRPF19-204ENST00000539960 ENPP3O14638 875 aa14.95□□□□□ -0.02
PRPF19-204ENST00000539960 GPR182O15218 404 aa14.95□□□□□ -0.02
PRPF19-204ENST00000539960 ASAP2O43150 1006 aa14.95□□□□□ -0.02
PRPF19-204ENST00000539960 DARSP14868 501 aaKnown RBP14.95□□□□□ -0.02
PRPF19-204ENST00000539960 LONP1P36776 959 aaKnown RBP14.95□□□□□ -0.02
PRPF19-204ENST00000539960 NASPP49321 788 aaPredicted RBP14.95□□□□□ -0.02
PRPF19-204ENST00000539960 GRIN1Q05586 938 aa14.95□□□□□ -0.02
PRPF19-204ENST00000539960 NFX1Q12986 1120 aaKnown RBP14.95□□□□□ -0.02
PRPF19-204ENST00000539960 PAK2Q13177 524 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms