RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MB21D1Q8N884 522 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 PRPF38AQ8NAV1 312 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 SREK1Q8WXA9 508 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 PHKBQ93100 1093 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 NUP88Q99567 741 aaPredicted RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 WDR18Q9BV38 432 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 EDEM3Q9BZQ6 932 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 DHX36Q9H2U1 1008 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 AS3MTQ9HBK9 375 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 DDX4Q9NQI0 724 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 DCTN4Q9UJW0 460 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 LAMA4Q16363 1823 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 DOCK2Q92608 1830 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 PTPRFP10586 1907 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 TCRBV5S4A2TA0A5A2 114 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 KCNJ18B7U540 433 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 CLGNO14967 610 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 IPO7O95373 1038 aaKnown RBP8.43□□□□□ -1.06
CCDC60-204ENST00000539847 TCP1P17987 556 aaKnown RBP8.43□□□□□ -1.06
CCDC60-204ENST00000539847 MAPK4P31152 587 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 GGCXP38435 758 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 CAP2P40123 477 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 EPHB4P54760 987 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 SH3BP2P78314 561 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 ZBED6P86452 979 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 SPP2Q13103 211 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 KCNJ12Q14500 433 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 COBLL1Q53SF7 1204 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 TREML2Q5T2D2 321 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 FOXR2Q6PJQ5 311 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 DEFB123Q8N688 67 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 ACRBPQ8NEB7 543 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 TRIM58Q8NG06 486 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 CPLX3Q8WVH0 158 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 P3H4Q92791 437 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 MMS19Q96T76 1030 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 SLF1Q9BQI6 1058 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 SELENOOQ9BVL4 669 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 NACAP1Q9BZK3 213 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
CCDC60-204ENST00000539847 C11orf49Q9H6J7 331 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 SUGCTQ9HAC7 445 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCDC60-204ENST00000539847 MAGEF1Q9HAY2 307 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 RBM28Q9NW13 759 aaKnown RBP8.43□□□□□ -1.06
CCDC60-204ENST00000539847 DONSONQ9NYP3 566 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 ANAPC4Q9UJX5 808 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 REXO2Q9Y3B8 237 aaKnown RBP8.43□□□□□ -1.06
CCDC60-204ENST00000539847 PCDHB6Q9Y5E3 794 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 DOCK1Q14185 1865 aa8.43□□□□□ -1.06
CCDC60-204ENST00000539847 MYH13Q9UKX3 1938 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 DOCK3Q8IZD9 2030 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 ERICH2A1L162 156 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 C19orf81C9J6K1 198 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 USO1O60763 962 aaKnown RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 TACC1O75410 805 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 LCA5LO95447 670 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 RECKO95980 971 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 ASNSP08243 561 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 CALM1P0DP23 149 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 CALM2P0DP24 149 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 CALM3P0DP25 149 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 COL6A1P12109 1028 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 KRT2P35908 639 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 LONP1P36776 959 aaKnown RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 MAGEA10P43363 369 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 FNTAP49354 379 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 SMTNP53814 917 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 BACE1P56817 501 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 ATP2C1P98194 919 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 AKAP17AQ02040 695 aaKnown RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 MECOMQ03112 1051 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 COL19A1Q14993 1142 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 WTAPQ15007 396 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 CCDC122Q5T0U0 273 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 RRAGBQ5VZM2 374 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 PPP4R3AQ6IN85 833 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 MFSD6Q6ZSS7 791 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 MICU3Q86XE3 530 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 FAM114A1Q8IWE2 563 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 IFNL3Q8IZI9 196 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 ADSSL1Q8N142 457 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 RNF10Q8N5U6 811 aaKnown RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 TPCN2Q8NHX9 752 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 DIS3LQ8TF46 1054 aaKnown RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 JAKMIP2Q96AA8 810 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 DHTKD1Q96HY7 919 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-204ENST00000539847 CABS1Q96KC9 395 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 PHF20Q9BVI0 1012 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 C1QTNF2Q9BXJ5 285 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 CUEDC2Q9H467 287 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 KAT14Q9H8E8 782 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 MTMR10Q9NXD2 777 aa8.42□□□□□ -1.06
CCDC60-204ENST00000539847 PI4KBQ9UBF8 816 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms