RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PCDHA4Q9UN74 947 aa17.27■□□□□ 0.36
UBE3B-211ENST00000539843 TBKBP1A7MCY6 615 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 PI4K2BG5E9Z4 385 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 VTNP04004 478 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 SRGAP2BP0DMP2 458 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 CDC42EP1Q00587 391 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 TBC1D8BQ0IIM8 1120 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 KLHL23Q8NBE8 558 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 MICAL1Q8TDZ2 1067 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 POF1BQ8WVV4 589 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 FAM122AQ96E09 287 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
UBE3B-211ENST00000539843 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
UBE3B-211ENST00000539843 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 TMEM161AQ9NX61 479 aa17.26■□□□□ 0.35
UBE3B-211ENST00000539843 BRWD1Q9NSI6 2320 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 MSH4O15457 936 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 GPR37L1O60883 481 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 ITGB1P05556 798 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 ATP4AP20648 1035 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 CLCN3P51790 818 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 PRKCEQ02156 737 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 HYAL1Q12794 435 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
UBE3B-211ENST00000539843 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 LRFN3Q9BTN0 628 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 TM6SF1Q9BZW5 370 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
UBE3B-211ENST00000539843 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
UBE3B-211ENST00000539843 CD207Q9UJ71 328 aa17.25■□□□□ 0.35
UBE3B-211ENST00000539843 ZBTB42B2RXF5 422 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 LAG3P18627 525 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 DNM2P50570 870 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
UBE3B-211ENST00000539843 Q4G0T1 1027 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 PDE12Q6L8Q7 609 aaKnown RBP17.24■□□□□ 0.35
UBE3B-211ENST00000539843 FAM228AQ86W67 206 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 ADHFE1Q8IWW8 467 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 BLIDQ8IZY5 108 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 CRIPAKQ8N1N5 446 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 NLRP7Q8WX94 980 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
UBE3B-211ENST00000539843 C9IYK1 514 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 DKC1O60832 514 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBE3B-211ENST00000539843 GPR32O75388 356 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 NONOQ15233 471 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBE3B-211ENST00000539843 CLUL1Q15846 466 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 KRT25Q7Z3Z0 450 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 LRRC43Q8N309 656 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 LRRC71Q8N4P6 559 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 LENG9Q96B70 501 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 JPH2Q9BR39 696 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-211ENST00000539843 TMEM117Q9H0C3 514 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 CDHR5Q9HBB8 845 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 TLR9Q9NR96 1032 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
UBE3B-211ENST00000539843 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-211ENST00000539843 ARIH1Q9Y4X5 557 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-211ENST00000539843 MUC3AQ02505 3323 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 DCXO43602 365 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 MARCH6O60337 910 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 MGEA5O60502 916 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 EIF4BP23588 611 aaKnown RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 PPM1AP35813 382 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 GATMP50440 423 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 STK3Q13188 491 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 BMS1Q14692 1282 aaKnown RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 SMAD2Q15796 467 aaKnown RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 XKR3Q5GH77 459 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 EFHBQ8N7U6 833 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 DAGLBQ8NCG7 672 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 CDCA3Q99618 268 aaPredicted RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 NAP1L4Q99733 375 aaKnown RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 INO80BQ9C086 356 aaPredicted RBP17.22■□□□□ 0.35
UBE3B-211ENST00000539843 UNC45AQ9H3U1 944 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 TLE6Q9H808 572 aa17.22■□□□□ 0.35
UBE3B-211ENST00000539843 CARNS1A5YM72 827 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 PRR33A8MZF0 331 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 MBTPS2O43462 519 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 FGF18O76093 207 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.35
UBE3B-211ENST00000539843 PLA2G5P39877 138 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 NRIP1P48552 1158 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 KRT17Q04695 432 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 ZP2Q05996 745 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms