RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 KIAA0319Q5VV43 1072 aa8.52□□□□□ -1.04
GNE-205ENST00000539815 TSC1Q92574 1164 aa8.52□□□□□ -1.04
GNE-205ENST00000539815 ARAP2Q8WZ64 1704 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 CHGBP05060 677 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 TRIM29Q14134 588 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 PGM5Q15124 567 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 JAKMIP3Q5VZ66 844 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 RAB11FIP4Q86YS3 637 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 VPS52Q8N1B4 723 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 SLC7A3Q8WY07 619 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 RUBCNQ92622 972 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 ZNF668Q96K58 619 aaPredicted RBP8.52□□□□□ -1.05
GNE-205ENST00000539815 NLRP4Q96MN2 994 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 OSMRQ99650 979 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 PARP2Q9UGN5 583 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 ADCY6O43306 1168 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 CEP57Q86XR8 500 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 EXOC8Q8IYI6 725 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 RASSF8Q8NHQ8 419 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 TIGD1Q96MW7 591 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 TCHPQ9BT92 498 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.05
GNE-205ENST00000539815 TCP11L1Q9NUJ3 509 aa8.52□□□□□ -1.05
GNE-205ENST00000539815 EPOPA6NHQ4 379 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 XYLBO75191 536 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 SDSP20132 328 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 TNNT3P45378 269 aaPredicted RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 RTN1Q16799 776 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 PTPN21Q16825 1174 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 ZNF484Q5JVG2 852 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 SWSAP1Q6NVH7 229 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 KCNT2Q6UVM3 1135 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 MIER3Q7Z3K6 550 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 SESTD1Q86VW0 696 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 OTUD6BQ8N6M0 293 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 SENP7Q9BQF6 1050 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 ADPGKQ9BRR6 497 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 ZNF577Q9BSK1 485 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 COLEC11Q9BWP8 271 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 JMJD4Q9H9V9 463 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 SEPT9Q9UHD8 586 aaPredicted RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 IQCEQ6IPM2 695 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 CYP2W1Q8TAV3 490 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 RIN2Q8WYP3 895 aaPredicted RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 TYW1Q9NV66 732 aaKnown RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 ZNF646O15015 1829 aaPredicted RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 TADA2AO75478 443 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 CXCL10P02778 98 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 CFHP08603 1231 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 SIX5Q8N196 739 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 MRPS27Q92552 414 aaKnown RBP8.51□□□□□ -1.05
GNE-205ENST00000539815 FAM212AQ96EL1 285 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 STK39Q9UEW8 545 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 ECM29Q5VYK3 1845 aa8.51□□□□□ -1.05
GNE-205ENST00000539815 OTOFQ9HC10 1997 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 CCDC194A0A1B0GVG4 234 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 RBM47A0AV96 593 aaKnown RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 INO80B-WBP1J3KQ70 363 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 TULP2O00295 520 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ZBTB43O43298 467 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 GLUD1P00367 558 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 RBM25P49756 843 aaKnown RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 HYAL1Q12794 435 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 MTERF2Q49AM1 385 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 HERC4Q5GLZ8 1057 aaPredicted RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 TRMT2AQ8IZ69 625 aaKnown RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 NEK9Q8TD19 979 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ZSWIM5Q9P217 1185 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ST3GAL5Q9UNP4 418 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 NUB1Q9Y5A7 615 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ACACBO00763 2458 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 PRC1O43663 620 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 POLGP54098 1239 aaPredicted RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 ARPP19P56211 112 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 TDGQ13569 410 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 FBXO47Q5MNV8 452 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ZNF654Q8IZM8 581 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 CA14Q9ULX7 337 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ASGR2P07307 311 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 ATF7P17544 494 aaPredicted RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 SARSP49591 514 aaKnown RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 NUBP1P53384 320 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 PFKPQ01813 784 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 GET4Q7L5D6 327 aaPredicted RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 HAUS6Q7Z4H7 955 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 SKAP1Q86WV1 359 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 TBC1D22BQ9NU19 505 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 TMEM161AQ9NX61 479 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 PCDHA6Q9UN73 950 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 PCDHA8Q9Y5H6 950 aa8.5□□□□□ -1.05
GNE-205ENST00000539815 MRPL42Q9Y6G3 142 aaKnown RBP8.5□□□□□ -1.05
GNE-205ENST00000539815 SMCO2A6NFE2 343 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms