RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 UNC5CO95185 931 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 NPTXRO95502 500 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 CNGA1P29973 690 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 SERPINB4P48594 390 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 CGB2Q6NT52 195 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 ZDHHC24Q6UX98 284 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 NAGPAQ9UK23 515 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRKCQ-203ENST00000539722 CBX6O95503 412 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 AGTP01019 485 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 NUDT17P0C025 328 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 UQCRFS1P1P0C7P4 283 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 ETS2P15036 469 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 GJB7Q6PEY0 223 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 APBB1IPQ7Z5R6 666 aaPredicted RBP13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 JAMLQ86YT9 394 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 GBP7Q8N8V2 638 aaPredicted RBP13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 MMTAG2Q9BU76 263 aaKnown RBP13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
PRKCQ-203ENST00000539722 BHMG1C9JSJ3 638 aaPredicted RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 FLOT1O75955 427 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 MYL1P05976 194 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 CCNG1P51959 295 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 RCAN1P53805 252 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 TSNAXIP1Q2TAA8 658 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 DCAF12L1Q5VU92 463 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 DUPD1Q68J44 220 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 INTS8Q75QN2 995 aaKnown RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 DTX3LQ8TDB6 740 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 GJA10Q969M2 543 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 USP17L21D6R901 530 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 AFPP02771 609 aaKnown RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 ZCCHC18P0CG32 403 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 RPL21P46778 160 aaKnown RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 AMPD3Q01432 767 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 CCDC6Q16204 474 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 OR52E8Q6IFG1 317 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 NT5DC3Q86UY8 548 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 MAIP1Q8WWC4 291 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 INTUQ9ULD6 942 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 POTEMA6NI47 508 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 CSF1RP07333 972 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 GOLGA8HP0CJ92 632 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 STX2P32856 288 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 TSG101Q99816 390 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 CUEDC2Q9H467 287 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 DENND2DQ9H6A0 471 aaPredicted RBP13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
PRKCQ-203ENST00000539722 KCNA3P22001 575 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 CALML3P27482 149 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 TJP1Q07157 1748 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 RFX8Q6ZV50 586 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 CDK5RAP3Q96JB5 506 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 RAB3IPQ96QF0 476 aaPredicted RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 TBC1D10AQ9BXI6 508 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 MYH3P11055 1940 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 KIAA0391O15091 583 aaKnown RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 GJB6O95452 261 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms