RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ERVK-21P61565 698 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 IL13RA1P78552 427 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 SSPNQ14714 243 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 MYBPC3Q14896 1274 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 FSCN1Q16658 493 aaKnown RBP8.85□□□□□ -0.99
TRAV11-201ENST00000539512 PTPN21Q16825 1174 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 ZNF648Q5T619 568 aaPredicted RBP8.85□□□□□ -0.99
TRAV11-201ENST00000539512 OGFOD2Q6N063 350 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 TMEFF1Q8IYR6 380 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 BHLHE22Q8NFJ8 381 aaPredicted RBP8.85□□□□□ -0.99
TRAV11-201ENST00000539512 FNIP1Q8TF40 1166 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 TGFBRAP1Q8WUH2 860 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 NTMQ9P121 344 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 FTSJ1Q9UET6 329 aa8.85□□□□□ -0.99
TRAV11-201ENST00000539512 GABRDO14764 452 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 PCDH8O95206 1070 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 TSPAN15O95858 294 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 C1QTNF9P0C862 333 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 MTHFD2P13995 350 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 MANFP55145 182 aaKnown RBP8.84□□□□□ -0.99
TRAV11-201ENST00000539512 NOLC1Q14978 699 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAV11-201ENST00000539512 PDCD1Q15116 288 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAV11-201ENST00000539512 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 LMBR1Q8WVP7 490 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 CHMP4CQ96CF2 233 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 RAX2Q96IS3 184 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 SEMA4AQ9H3S1 761 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 MTG2Q9H4K7 406 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 KCND1Q9NSA2 647 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 DNAJC28Q9NX36 388 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 KCMF1Q9P0J7 381 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 G3BP2Q9UN86 482 aaKnown RBP8.84□□□□□ -0.99
TRAV11-201ENST00000539512 PPP2R3BQ9Y5P8 575 aa8.84□□□□□ -0.99
TRAV11-201ENST00000539512 XPOTO43592 962 aaKnown RBP8.83□□□□□ -1
TRAV11-201ENST00000539512 SNUPNO95149 360 aaKnown RBP8.83□□□□□ -1
TRAV11-201ENST00000539512 IL18BPO95998 194 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
TRAV11-201ENST00000539512 XPAP23025 273 aaPredicted RBP8.83□□□□□ -1
TRAV11-201ENST00000539512 ADCY8P40145 1251 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 EPHB1P54762 984 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 CD83Q01151 205 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 ACAP2Q15057 778 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 TTF1Q15361 905 aaPredicted RBP8.83□□□□□ -1
TRAV11-201ENST00000539512 CT83Q5H943 113 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 GRAMD4Q6IC98 578 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 TMEM151BQ8IW70 566 aa8.83□□□□□ -1
TRAV11-201ENST00000539512 QRSL1Q9H0R6 528 aaKnown RBP8.83□□□□□ -1
TRAV11-201ENST00000539512 PRSS38A1L453 326 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 ELL2O00472 640 aaPredicted RBP8.82□□□□□ -1
TRAV11-201ENST00000539512 CYP1A1P04798 512 aaPredicted RBP8.82□□□□□ -1
TRAV11-201ENST00000539512 RPL13P26373 211 aaKnown RBP8.82□□□□□ -1
TRAV11-201ENST00000539512 IL13P35225 146 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 LINC00310P59036 64 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 STILQ15468 1287 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 KCNA10Q16322 511 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 DGKDQ16760 1214 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 ZBTB41Q5SVQ8 909 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 POU5F2Q8N7G0 328 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 RSAD2Q8WXG1 361 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 FUBP3Q96I24 572 aaKnown RBP eCLIP8.82□□□□□ -1
TRAV11-201ENST00000539512 HIST1H2AHQ96KK5 128 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 HIST1H2AJQ99878 128 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 NOL10Q9BSC4 688 aaKnown RBP8.82□□□□□ -1
TRAV11-201ENST00000539512 CD320Q9NPF0 282 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 CCM2LQ9NUG4 571 aaPredicted RBP8.82□□□□□ -1
TRAV11-201ENST00000539512 KLHL42Q9P2K6 505 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 ZBTB21Q9ULJ3 1066 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 USP18Q9UMW8 372 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 EDARQ9UNE0 448 aa8.82□□□□□ -1
TRAV11-201ENST00000539512 MYPNQ86TC9 1320 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 NPIPB6E9PJ23 425 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 NUAK1O60285 661 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 CT47B1P0C2W7 299 aaPredicted RBP8.81□□□□□ -1
TRAV11-201ENST00000539512 AFF3P51826 1226 aaKnown RBP8.81□□□□□ -1
TRAV11-201ENST00000539512 HTRA3P83110 453 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 MOGSQ13724 837 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 SPIDRQ14159 915 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 CIAPIN1Q6FI81 312 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 KANSL1Q7Z3B3 1105 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 CMIPQ8IY22 773 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 CDYL2Q8N8U2 506 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 EAF2Q96CJ1 260 aaPredicted RBP8.81□□□□□ -1
TRAV11-201ENST00000539512 SAE1Q9UBE0 346 aaPredicted RBP8.81□□□□□ -1
TRAV11-201ENST00000539512 PCDHB6Q9Y5E3 794 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 NUMBLQ9Y6R0 609 aa8.81□□□□□ -1
TRAV11-201ENST00000539512 A0A0G2JNJ9 132 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 DDX3XO00571 662 aaKnown RBP eCLIP8.8□□□□□ -1
TRAV11-201ENST00000539512 NRP2O60462 931 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 KNG1P01042 644 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 SARSP49591 514 aaKnown RBP8.8□□□□□ -1
TRAV11-201ENST00000539512 PPARAQ07869 468 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 KANK2Q63ZY3 851 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 SAPCD2Q86UD0 394 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 C1orf162Q8NEQ5 155 aaPredicted RBP8.8□□□□□ -1
TRAV11-201ENST00000539512 OR5AN1Q8NGI8 311 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 FAXDC2Q96IV6 333 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 TMEM168Q9H0V1 697 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 KCTD10Q9H3F6 313 aa8.8□□□□□ -1
TRAV11-201ENST00000539512 Q9UFV3 132 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms