RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RUSC1Q9BVN2 902 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 SEMA6BQ9H3T3 888 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 L2HGDHQ9H9P8 463 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SLC39A2Q9NP94 309 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 DBR1Q9UK59 544 aaKnown RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 MAPK8IP1Q9UQF2 711 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SYNGAP1Q96PV0 1343 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 WDR64B1ANS9 1081 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 TULP2O00295 520 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 SSBP05455 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDB1-213ENST00000539332 GAP43P17677 238 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 EEF1GP26641 437 aaKnown RBP9.76□□□□□ -0.85
DDB1-213ENST00000539332 RGS2P41220 211 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 C1QTNF8P60827 252 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 BMT2Q1RMZ1 405 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 ANKRD40Q6AI12 368 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 KCNV1Q6PIU1 500 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 TPH2Q8IWU9 490 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 C4orf19Q8IY42 314 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 CCAR2Q8N163 923 aaKnown RBP9.76□□□□□ -0.85
DDB1-213ENST00000539332 MSL3Q8N5Y2 521 aaKnown RBP9.76□□□□□ -0.85
DDB1-213ENST00000539332 KATNBL1Q9H079 304 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 BCAS3Q9H6U6 928 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 ZSWIM4Q9H7M6 989 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 JPH1Q9HDC5 661 aaPredicted RBP9.76□□□□□ -0.85
DDB1-213ENST00000539332 OLFML3Q9NRN5 406 aa9.76□□□□□ -0.85
DDB1-213ENST00000539332 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
DDB1-213ENST00000539332 ZNF215Q9UL58 517 aaPredicted RBP9.76□□□□□ -0.85
DDB1-213ENST00000539332 KCNJ18B7U540 433 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 H2AFXP16104 143 aaPredicted RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 CYP2B6P20813 491 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 CYP2C19P33261 490 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 QARSP47897 775 aaKnown RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 CAP1Q01518 475 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 KCNJ12Q14500 433 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 CCDC62Q6P9F0 684 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 LRRC55Q6ZSA7 311 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 TMC6Q7Z403 805 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 MYOCDQ8IZQ8 938 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 TXLNBQ8N3L3 684 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 GLIS3Q8NEA6 775 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SCFD2Q8WU76 684 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 APBA2Q99767 749 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 FGFBP2Q9BYJ0 223 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 KCTD10Q9H3F6 313 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 VTA1Q9NP79 307 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 PDGFCQ9NRA1 345 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 FLRT1Q9NZU1 646 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 ODF2LQ9ULJ1 636 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 V9GYY5 206 aaPredicted RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 ITIH6Q6UXX5 1313 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 GPR25O00155 361 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 ARIH2O95376 493 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 COPB1P53618 953 aaKnown RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 PSMC5P62195 406 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 CCZ1BP86790 482 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 CCZ1P86791 482 aaPredicted RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 MAPK7Q13164 816 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 GPS2Q13227 327 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 NEDD9Q14511 834 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 KIF22Q14807 665 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 CCL14Q16627 93 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 LY6KQ17RY6 165 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 HSP90AA4PQ58FG1 418 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 HERC4Q5GLZ8 1057 aaPredicted RBP9.75□□□□□ -0.85
DDB1-213ENST00000539332 OLFML2BQ68BL8 750 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 TAPT1Q6NXT6 567 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 ARMCX5Q6P1M9 558 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 FBXO38Q6PIJ6 1188 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 CYFIP1Q7L576 1253 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SFR1Q86XK3 245 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 CSGALNACT2Q8N6G5 542 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 PIGOQ8TEQ8 1089 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SCFD1Q8WVM8 642 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 ABHD16BQ9H3Z7 469 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SAGE1Q9NXZ1 904 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SEL1LQ9UBV2 794 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SLC9A2Q9UBY0 812 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 TCEAL9Q9UHQ7 104 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 SAMM50Q9Y512 469 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 COL4A3BPQ9Y5P4 624 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 UBE4BO95155 1302 aa9.75□□□□□ -0.85
DDB1-213ENST00000539332 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
DDB1-213ENST00000539332 LGALS16A8MUM7 142 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 RSPH10B2B2RC85 870 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 ZBTB39O15060 712 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 TEX33O43247 280 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 SORBS3O60504 671 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 FARP2O94887 1054 aaPredicted RBP9.74□□□□□ -0.85
DDB1-213ENST00000539332 STBD1O95210 358 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 IGHA2P01877 340 aa9.74□□□□□ -0.85
DDB1-213ENST00000539332 KRT18P05783 430 aaKnown RBP9.74□□□□□ -0.85
DDB1-213ENST00000539332 RSPH10BP0C881 870 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms