RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 TRIM71Q2Q1W2 868 aaKnown RBP11.3□□□□□ -0.6
PTPN6-212ENST00000539029 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 HOMER1Q86YM7 354 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 CMTR1Q8N1G2 835 aaKnown RBP11.3□□□□□ -0.6
PTPN6-212ENST00000539029 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 OR6J1Q8NGC5 347 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 SEPT8Q92599 483 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
PTPN6-212ENST00000539029 VTA1Q9NP79 307 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
PTPN6-212ENST00000539029 HOMER2Q9NSB8 354 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 SEMA4GQ9NTN9 838 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 ZSCAN32Q9NX65 697 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 SEC63Q9UGP8 760 aaKnown RBP11.3□□□□□ -0.6
PTPN6-212ENST00000539029 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 GPSM3Q9Y4H4 160 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 PCDHA1Q9Y5I3 950 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 KALRNO60229 2985 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 LAMA5O15230 3695 aa11.3□□□□□ -0.6
PTPN6-212ENST00000539029 NFIBO00712 420 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
PTPN6-212ENST00000539029 PTK7Q13308 1070 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 BTG3Q14201 252 aaPredicted RBP11.29□□□□□ -0.6
PTPN6-212ENST00000539029 USH1GQ495M9 461 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 PHLDB3Q6NSJ2 640 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 C19orf48Q6RUI8 117 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 MCF2L2Q86YR7 1114 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 MICAL1Q8TDZ2 1067 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
PTPN6-212ENST00000539029 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
PTPN6-212ENST00000539029 CYP26B1Q9NR63 512 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 MAP3K20Q9NYL2 800 aaKnown RBP11.29□□□□□ -0.6
PTPN6-212ENST00000539029 CYP39A1Q9NYL5 469 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 WASF3Q9UPY6 502 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
PTPN6-212ENST00000539029 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
PTPN6-212ENST00000539029 ASXL3Q9C0F0 2248 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 LOC102724159A0A0B4J2E5 919 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 A6NJR5 290 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 hCG_1984214I3L0E3 225 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 OPLAHO14841 1288 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 ARHGAP6O43182 974 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 PRPF3O43395 683 aaKnown RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 KCNK5O95279 499 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 SPINK2P20155 84 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 MTHFRP42898 656 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 ITIH3Q06033 890 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 SCRN1Q12765 414 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 CSRP2Q16527 193 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 ME3Q16798 604 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 LAIR1Q6GTX8 287 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 TEX2Q8IWB9 1127 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 CCDC82Q8N4S0 544 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 ZNF713Q8N859 430 aaPredicted RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 WDR11Q9BZH6 1224 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 ADAM7Q9H2U9 754 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 RAB23Q9ULC3 237 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 V9GY48 417 aaPredicted RBP11.28□□□□□ -0.6
PTPN6-212ENST00000539029 MIA3Q5JRA6 1907 aa11.28□□□□□ -0.6
PTPN6-212ENST00000539029 MYH7BA7E2Y1 1941 aa11.27□□□□□ -0.6
PTPN6-212ENST00000539029 LCTP09848 1927 aa11.27□□□□□ -0.6
PTPN6-212ENST00000539029 CPLX1O14810 134 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 CDKL5O76039 1030 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 RETP07949 1114 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 CFHP08603 1231 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 HSD17B4P51659 736 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 LIMK1P53667 647 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.61
PTPN6-212ENST00000539029 CSTF1Q05048 431 aaKnown RBP11.27□□□□□ -0.61
PTPN6-212ENST00000539029 FOXC1Q12948 553 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 STK3Q13188 491 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 BAATQ14032 418 aaPredicted RBP11.27□□□□□ -0.61
PTPN6-212ENST00000539029 CCDC6Q16204 474 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 PFKFB3Q16875 520 aaPredicted RBP11.27□□□□□ -0.61
PTPN6-212ENST00000539029 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 RNF207Q6ZRF8 634 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 RASGRP4Q8TDF6 673 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 WNT8BQ93098 351 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.61
PTPN6-212ENST00000539029 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
PTPN6-212ENST00000539029 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
PTPN6-212ENST00000539029 PTPDC1A2A3K4 754 aa11.26□□□□□ -0.61
PTPN6-212ENST00000539029 RSPH10B2B2RC85 870 aa11.26□□□□□ -0.61
PTPN6-212ENST00000539029 MAP3K13O43283 966 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms