RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
GGA3-202ENST00000538886 DMP1Q13316 513 aaPredicted RBP9.69□□□□□ -0.86
GGA3-202ENST00000538886 XKR3Q5GH77 459 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 MICALL1Q8N3F8 863 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 PXYLP1Q8TE99 480 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 PPM1EQ8WY54 764 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 LARP4BQ92615 738 aaKnown RBP9.69□□□□□ -0.86
GGA3-202ENST00000538886 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 SLFN14P0C7P3 912 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 NDUFA8P51970 172 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 EPHA7Q15375 998 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 GRIK4Q16099 956 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 CEP135Q66GS9 1140 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 CATSPER3Q86XQ3 398 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 CCDC65Q8IXS2 484 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 PDLIM2Q96JY6 352 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 RIT2Q99578 217 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 RNF19AQ9NV58 838 aa9.69□□□□□ -0.86
GGA3-202ENST00000538886 CWC15Q9P013 229 aaKnown RBP9.69□□□□□ -0.86
GGA3-202ENST00000538886 DIS3Q9Y2L1 958 aaKnown RBP9.69□□□□□ -0.86
GGA3-202ENST00000538886 PAPPA2Q9BXP8 1791 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 SPATA31C2B4DYI2 1134 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 HNRNPDLO14979 420 aaKnown RBP9.68□□□□□ -0.86
GGA3-202ENST00000538886 NKRFO15226 690 aaKnown RBP eCLIP9.68□□□□□ -0.86
GGA3-202ENST00000538886 YEATS4O95619 227 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 CYP2C18P33260 490 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 KCNJ6P48051 423 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 CAP1Q01518 475 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 NAA30Q147X3 362 aaPredicted RBP9.68□□□□□ -0.86
GGA3-202ENST00000538886 THNSL1Q8IYQ7 743 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 NEK11Q8NG66 645 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 MTMR8Q96EF0 704 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 FAM167AQ96KS9 214 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 C11orf49Q9H6J7 331 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 KMT5AQ9NQR1 393 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 PIN4Q9Y237 131 aaKnown RBP9.68□□□□□ -0.86
GGA3-202ENST00000538886 SYNRGQ9UMZ2 1314 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 K7ERI5 159 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 HBP1O60381 514 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 MMP3P08254 477 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 DDIT3P35638 169 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 LONP1P36776 959 aaKnown RBP9.68□□□□□ -0.86
GGA3-202ENST00000538886 TRIM60Q495X7 471 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 HIPK3Q9H422 1215 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 UBIAD1Q9Y5Z9 338 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 SYNGAP1Q96PV0 1343 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 SLC16A4O15374 487 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 TREHO43280 583 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 OATP04181 439 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 GYS2P54840 703 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 E2F4Q16254 413 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 PAN2Q504Q3 1202 aaKnown RBP9.68□□□□□ -0.86
GGA3-202ENST00000538886 NFRKBQ6P4R8 1299 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 FAM161BQ96MY7 647 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 MTRQ99707 1265 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 NAV1Q8NEY1 1877 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 KDM3AQ9Y4C1 1321 aa9.68□□□□□ -0.86
GGA3-202ENST00000538886 FAM170AA1A519 330 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 MED24O75448 989 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 RPS6KA5O75582 802 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 CCNE2O96020 404 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 LIG4P49917 911 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 PNOCQ13519 176 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 IER5Q5VY09 327 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 ZNF746Q6NUN9 644 aaPredicted RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 STXBP4Q6ZWJ1 553 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 HS2ST1Q7LGA3 356 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 HPS3Q969F9 1004 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 ADPGKQ9BRR6 497 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 POLR3FQ9H1D9 316 aaPredicted RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 PCIF1Q9H4Z3 704 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 ATP6V0A4Q9HBG4 840 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 GEMIN8Q9NWZ8 242 aaKnown RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 GDAQ9Y2T3 454 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 KIAA1551Q9HCM1 1747 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 PHACTR2O75167 634 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 SMIM10L2AP0DMW4 78 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 SMIM10L2BP0DMW5 78 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 UBE2HP62256 183 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 KRBA2Q6ZNG9 492 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 TRPV1Q8NER1 839 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 FAM193BQ96PV7 902 aaPredicted RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 ST7Q9NRC1 585 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 LAD1O00515 517 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 KRT19P08727 400 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 ZNF865P0CJ78 1059 aaPredicted RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 CYP2J2P51589 502 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 ENOX2Q16206 610 aaKnown RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 SMYD4Q8IYR2 804 aaPredicted RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 GPR20Q99678 358 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 JPH2Q9BR39 696 aaPredicted RBP9.67□□□□□ -0.86
GGA3-202ENST00000538886 LRRC27Q9C0I9 530 aa9.67□□□□□ -0.86
GGA3-202ENST00000538886 NR1I2O75469 434 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 NOVP48745 357 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 ATP2C1P98194 919 aaPredicted RBP9.66□□□□□ -0.86
GGA3-202ENST00000538886 TFDP1Q14186 410 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms