RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
USP3-203ENST00000538686 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
USP3-203ENST00000538686 XDHP47989 1333 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 MAPK13O15264 365 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 ZBTB43O43298 467 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 SF3A3Q12874 501 aaKnown RBP eCLIP13.4□□□□□ -0.261e-7■■■■□ 19.8
USP3-203ENST00000538686 MTFR1Q15390 333 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 NTRK3Q16288 839 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 INAQ16352 499 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
USP3-203ENST00000538686 NANOGNBQ7Z5D8 188 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
USP3-203ENST00000538686 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP3-203ENST00000538686 PASD1Q8IV76 773 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 CROCCP3Q8IVE0 287 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 DEPTORQ8TB45 409 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 BHMTQ93088 406 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 SNX27Q96L92 541 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 ROPN1BQ9BZX4 212 aaPredicted RBP13.4□□□□□ -0.26
USP3-203ENST00000538686 ROPN1Q9HAT0 212 aaPredicted RBP13.4□□□□□ -0.26
USP3-203ENST00000538686 FAIMQ9NVQ4 179 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 STK32BQ9NY57 414 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 TBC1D7Q9P0N9 293 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 EFR3BQ9Y2G0 817 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 NALCNQ8IZF0 1738 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
USP3-203ENST00000538686 BTNL10A8MVZ5 291 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 PLEKP08567 350 aaPredicted RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 CASP1P29466 404 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 RCN1Q15293 331 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 ASTE1Q2TB18 679 aaPredicted RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.27
USP3-203ENST00000538686 APOA5Q6Q788 366 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 B3GNT6Q6ZMB0 384 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 C4orf50Q6ZRC1 276 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 TTC8Q8TAM2 541 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 PHKBQ93100 1093 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 EPSTI1Q96J88 318 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 LRRC37BQ96QE4 947 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.27
USP3-203ENST00000538686 LNPEPQ9UIQ6 1025 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 ANGPTL2Q9UKU9 493 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 MAP3K2Q9Y2U5 619 aa13.4□□□□□ -0.27
USP3-203ENST00000538686 COBLO75128 1261 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 ENTPD5O75356 428 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 PTPN4P29074 926 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 ECHDC2Q86YB7 292 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 STMN2Q93045 179 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 CUEDC2Q9H467 287 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 SYNCQ9H7C4 482 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 NLRC4Q9NPP4 1024 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 INIPQ9NRY2 104 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 FADS3Q9Y5Q0 445 aa13.39□□□□□ -0.27
USP3-203ENST00000538686 RIMS1Q86UR5 1692 aaKnown RBP13.39□□□□□ -0.27
USP3-203ENST00000538686 NID2Q14112 1375 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 KCNK3O14649 394 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 TBC1D12O60347 775 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 CBFA2T3O75081 653 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 FTCDO95954 541 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 ALDH2P05091 517 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 SPATA31D3P0C874 917 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 UBTFL6P0CB48 400 aaPredicted RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 IFNAR1P17181 557 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 USP11P51784 963 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 EHHADHQ08426 723 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 BCL2A1Q16548 175 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 CCDC153Q494R4 210 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 HSP90AA5PQ58FG0 334 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 SPATA31D4Q6ZUB0 917 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 ITPKCQ96DU7 683 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 MAGEB18Q96M61 343 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 NOC4LQ9BVI4 516 aaKnown RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 IGSF1Q8N6C5 1336 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 TLDC2A0PJX2 215 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 ZNF213O14771 459 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 CAPN9O14815 690 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 MTIF2P46199 727 aaKnown RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 RSPH3Q86UC2 560 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 RIBC1Q8N443 379 aaPredicted RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
USP3-203ENST00000538686 SYN2Q92777 582 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms