RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GUCY2CP25092 1073 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 ARHGAP25P42331 645 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 TERF1P54274 439 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 KRT76Q01546 638 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 TSR1Q2NL82 804 aaKnown RBP15.52■□□□□ 0.07
ACTN1-205ENST00000538545 ZNF569Q5MCW4 686 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 CACNA2D4Q7Z3S7 1137 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 ELMO3Q96BJ8 720 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 GPRASP2Q96D09 838 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 CEP170P1Q96L14 293 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 LACRTQ9GZZ8 138 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 PORCNQ9H237 461 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 SLC9A2Q9UBY0 812 aa15.52■□□□□ 0.07
ACTN1-205ENST00000538545 SEPT9Q9UHD8 586 aaPredicted RBP15.52■□□□□ 0.07
ACTN1-205ENST00000538545 AJAP1Q9UKB5 411 aaPredicted RBP15.52■□□□□ 0.07
ACTN1-205ENST00000538545 CCDC169A6NNP5 214 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 LY6KQ17RY6 165 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 BMT2Q1RMZ1 405 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 ARHGAP29Q52LW3 1261 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 NEK11Q8NG66 645 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 EFCC1Q9HA90 598 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 AGPAT3Q9NRZ7 376 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 GOLGA8IPA6NC78 632 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 GOLGA8JA6NMD2 632 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 STXBP2Q15833 593 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 MTERF2Q49AM1 385 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 RIOX2Q8IUF8 465 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 ZC3H3Q8IXZ2 948 aaKnown RBP15.51■□□□□ 0.07
ACTN1-205ENST00000538545 C4orf19Q8IY42 314 aa15.51■□□□□ 0.07
ACTN1-205ENST00000538545 MYH10P35580 1976 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 TLR2O60603 784 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 ATP4AP20648 1035 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-205ENST00000538545 GPAT2Q6NUI2 795 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 SLC35C1Q96A29 364 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 AGTPBP1Q9UPW5 1226 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 STBD1O95210 358 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 ARIH2O95376 493 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 XRCC5P13010 732 aaKnown RBP15.5■□□□□ 0.07
ACTN1-205ENST00000538545 JAK3P52333 1124 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 DLG4P78352 724 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 PRKCEQ02156 737 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 MEA1Q16626 185 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 SLC35F6Q8N357 371 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 CHST13Q8NET6 341 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 NEK9Q8TD19 979 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 NUP58Q9BVL2 599 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 EPC1Q9H2F5 836 aa15.5■□□□□ 0.07
ACTN1-205ENST00000538545 SPATA31C2B4DYI2 1134 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 CCP110O43303 1012 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 UBA1P22314 1058 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 EIF4A3P38919 411 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 HAUS6Q7Z4H7 955 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 TRIM50Q86XT4 487 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 FAM186BQ8IYM0 893 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ANKRD13CQ8N6S4 541 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 PROCA1Q8NCQ7 364 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 PFASO15067 1338 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ADGRA3Q8IWK6 1321 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ENC1O14682 589 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 PPP1R37O75864 691 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 CASQ1P31415 396 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ZNF746Q6NUN9 644 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 COPS5Q92905 334 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 SLC10A4Q96EP9 437 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 LARSQ9P2J5 1176 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 DBR1Q9UK59 544 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 PLAGL2Q9UPG8 496 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 FHOD1Q9Y613 1164 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 MYPNQ86TC9 1320 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 MUTP22033 750 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 MARSP56192 900 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 GFPT1Q06210 699 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 NCBP1Q09161 790 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 RAPGEF1Q13905 1077 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 CBWD6Q4V339 395 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 CBWD3Q5JTY5 395 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 CBWD5Q5RIA9 395 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 GJC2Q5T442 439 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ABHD15Q6UXT9 468 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 FBXO16Q8IX29 292 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 FAM133AQ8N9E0 248 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ZNF397Q8NF99 534 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 FGD4Q96M96 766 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ZNHIT6Q9NWK9 470 aaKnown RBP15.49■□□□□ 0.07
ACTN1-205ENST00000538545 KCNH4Q9UQ05 1017 aa15.49■□□□□ 0.07
ACTN1-205ENST00000538545 ZNFX1Q9P2E3 1918 aaKnown RBP15.48■□□□□ 0.07
ACTN1-205ENST00000538545 DYNC1I1O14576 645 aa15.48■□□□□ 0.07
ACTN1-205ENST00000538545 EIF3DO15371 548 aaKnown RBP eCLIP15.48■□□□□ 0.07
ACTN1-205ENST00000538545 EXOC3O60645 756 aa15.48■□□□□ 0.07
ACTN1-205ENST00000538545 PLS3P13797 630 aa15.48■□□□□ 0.07
ACTN1-205ENST00000538545 MARK3P27448 753 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms