RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SLC38A10Q9HBR0 1119 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 HPCAL4Q9UM19 191 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 MTO1Q9Y2Z2 717 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 VHLP40337 213 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 DDB1Q16531 1140 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 GPIHBP1Q8IV16 184 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 PRPF38AQ8NAV1 312 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 ZNF555Q8NEP9 628 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 THOC1Q96FV9 657 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 ASPSCR1Q9BZE9 553 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 TRIM45Q9H8W5 580 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 KIAA1586Q9HCI6 787 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 SLC12A6Q9UHW9 1150 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 ATP11BQ9Y2G3 1177 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 WDR91A4D1P6 747 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 ADCY3O60266 1144 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 KLHL2O95198 593 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 BBS9Q3SYG4 887 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 SLC44A4Q53GD3 710 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 TRIM72Q6ZMU5 477 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 SEC16BQ96JE7 1060 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 PARVGQ9HBI0 331 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 GPHNQ9NQX3 736 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 LRRIQ3A6PVS8 624 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 USP17L12C9JPN9 530 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 USP17L21D6R901 530 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 CYP21A2P08686 494 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 HSPA1AP0DMV8 641 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 HSPA1BP0DMV9 641 aaKnown RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 CDH2P19022 906 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 POLGP54098 1239 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 SETD3Q86TU7 594 aaPredicted RBP7.39□□□□□ -1.23
SORT1-209ENST00000538502 CNBD1Q8NA66 436 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 GJA10Q969M2 543 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 TSC22D4Q9Y3Q8 395 aa7.39□□□□□ -1.23
SORT1-209ENST00000538502 RNF103-CHMP3A0A140T963 221 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 E2F6O75461 281 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 FAM107AO95990 144 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 LDHAP00338 332 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 ATICP31939 592 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 CARSP49589 748 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 ABCE1P61221 599 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 PTPROQ16827 1216 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 HP1BP3Q5SSJ5 553 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 ACBD5Q5T8D3 534 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 SLFN12LQ6IEE8 588 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ADCK1Q86TW2 530 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 LRRC59Q96AG4 307 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 MMS19Q96T76 1030 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 MPP6Q9NZW5 540 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 KIF17Q9P2E2 1029 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.38□□□□□ -1.23
SORT1-209ENST00000538502 PIK3R2O00459 728 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 GCP02774 474 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 S100A5P33763 92 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ATP6V1E1P36543 226 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 MXI1P50539 228 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 TRPM8Q7Z2W7 1104 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 STX19Q8N4C7 294 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 CNBD2Q96M20 576 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 RANBP17Q9H2T7 1088 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 SMYD3Q9H7B4 428 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 DMRT2Q9Y5R5 561 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ASXL2Q76L83 1435 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 CFAP74Q9C0B2 1584 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 STRNO43815 780 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 MARK3P27448 753 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 HNRNPH1P31943 449 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 SLC1A1P43005 524 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ARL13BQ3SXY8 428 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ENOSF1Q7L5Y1 443 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ELOA2Q8IYF1 753 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 AMNQ9BXJ7 453 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 DDX28Q9NUL7 540 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 CCDC78A2IDD5 438 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 CCT8L1PA6NM43 557 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 TMOD1P28289 359 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 GRIN1Q05586 938 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 PPP1R18Q6NYC8 613 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SLC26A7Q8TE54 656 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 JDP2Q8WYK2 163 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SLC40A1Q9NP59 571 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SLC13A4Q9UKG4 626 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SNX12Q9UMY4 172 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SNX24Q9Y343 169 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SHROOM2Q13796 1616 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 PLA2G4BP0C869 781 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 PLCG1P19174 1290 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ADD2P35612 726 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 YWHAHQ04917 246 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 GPKOWQ92917 476 aaPredicted RBP eCLIP7.38□□□□□ -1.233e-15■■■□□ 15.9
SORT1-209ENST00000538502 IL17RAQ96F46 866 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 SNX25Q9H3E2 840 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 KMT5AQ9NQR1 393 aa7.38□□□□□ -1.23
SORT1-209ENST00000538502 ZNF219Q9P2Y4 722 aaPredicted RBP7.38□□□□□ -1.23
SORT1-209ENST00000538502 IP6K2Q9UHH9 426 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms