RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ALKBH5Q6P6C2 394 aaKnown RBP27.21■■□□□ 1.95
RAB40C-204ENST00000538492 MXRA8Q9BRK3 442 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 PLEKHA4Q9H4M7 779 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 STIM2Q9P246 746 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 NFIBO00712 420 aa27.2■■□□□ 1.95
RAB40C-204ENST00000538492 PPP1R12BO60237 982 aaPredicted RBP27.2■■□□□ 1.95
RAB40C-204ENST00000538492 RNF40O75150 1001 aa27.2■■□□□ 1.95
RAB40C-204ENST00000538492 AARSP49588 968 aaKnown RBP eCLIP27.2■■□□□ 1.953e-8■■■■■ 29.1
RAB40C-204ENST00000538492 ZNF131P52739 623 aa27.2■■□□□ 1.95
RAB40C-204ENST00000538492 JAM2P57087 298 aa27.2■■□□□ 1.95
RAB40C-204ENST00000538492 NOP2P46087 812 aaKnown RBP27.2■■□□□ 1.94
RAB40C-204ENST00000538492 GRIPAP1Q4V328 841 aa27.2■■□□□ 1.94
RAB40C-204ENST00000538492 SND1Q7KZF4 910 aaKnown RBP eCLIP27.2■■□□□ 1.94
RAB40C-204ENST00000538492 HS2ST1Q7LGA3 356 aa27.2■■□□□ 1.94
RAB40C-204ENST00000538492 IL31RAQ8NI17 732 aa27.2■■□□□ 1.94
RAB40C-204ENST00000538492 ARHGEF35A5YM69 484 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 GFPT2O94808 682 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 ASNSP08243 561 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 DPEP1P16444 411 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 GGCXP38435 758 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 DGKZQ13574 1117 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 B3GNT9Q6UX72 402 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 CPXCR1Q8N123 301 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 AGPAT3Q9NRZ7 376 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 SEL1LQ9UBV2 794 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 ZNF536O15090 1300 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 PRKCIP41743 596 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 PTGER2P43116 358 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 HOOK2Q96ED9 719 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 FAM204AQ9H8W3 233 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 KCNH7Q9NS40 1196 aa27.19■■□□□ 1.94
RAB40C-204ENST00000538492 WNT10BO00744 389 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 HIP1RO75146 1068 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 TRIM49P0CI25 452 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 TRIM49CP0CI26 452 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 C10orf76Q5T2E6 689 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 FKBP1CQ5VVH2 108 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 FAM83AQ86UY5 434 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 RDH13Q8NBN7 331 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 CAMKK2Q96RR4 588 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 HOMER2Q9NSB8 354 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 PSD3Q9NYI0 1048 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 FBXL5Q9UKA1 691 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 ODF2LQ9ULJ1 636 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 UTRNP46939 3433 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 GTPBP10A4D1E9 387 aaKnown RBP27.18■■□□□ 1.94
RAB40C-204ENST00000538492 FLOT1O75955 427 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 ICAM1P05362 532 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 HNRNPH2P55795 449 aaKnown RBP27.18■■□□□ 1.94
RAB40C-204ENST00000538492 ZNRF3Q9ULT6 936 aa27.18■■□□□ 1.94
RAB40C-204ENST00000538492 FMO5P49326 533 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 HSD17B4P51659 736 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 CBWD6Q4V339 395 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 CBWD3Q5JTY5 395 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 CBWD5Q5RIA9 395 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 FRMD4BQ9Y2L6 1034 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 KCNA3P22001 575 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 MUTP22033 750 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 STXBP4Q6ZWJ1 553 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 MIER3Q7Z3K6 550 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 NIM1KQ8IY84 436 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 SYCP3Q8IZU3 236 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 DAW1Q8N136 415 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 RNF14Q9UBS8 474 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 PGAP2Q9UHJ9 254 aa27.17■■□□□ 1.94
RAB40C-204ENST00000538492 RIT2Q99578 217 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 KCND2Q9NZV8 630 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 FAM170AA1A519 330 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 AGPSO00116 658 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 MAPK7Q13164 816 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 NFIL3Q16649 462 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 PADI6Q6TGC4 694 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-204ENST00000538492 TRMT1LQ7Z2T5 733 aaKnown RBP27.16■■□□□ 1.94
RAB40C-204ENST00000538492 SH2D3AQ9BRG2 576 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 SAMM50Q9Y512 469 aa27.16■■□□□ 1.94
RAB40C-204ENST00000538492 BTNL10A8MVZ5 291 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 CXCL9Q07325 125 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 VPS36Q86VN1 386 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 INPP4AQ96PE3 977 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-204ENST00000538492 MKNK1Q9BUB5 465 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 RGPD3A6NKT7 1758 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-204ENST00000538492 RGPD4Q7Z3J3 1758 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 ZSCAN5CA6NGD5 496 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-204ENST00000538492 DDX3XO00571 662 aaKnown RBP eCLIP27.15■■□□□ 1.942e-7■■■■■ 28.9
RAB40C-204ENST00000538492 KCNK3O14649 394 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 EVI5O60447 810 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 GLI1P08151 1106 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 ALAS1P13196 640 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 GUCY2CP25092 1073 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 AGBL3Q8NEM8 1001 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 U2AF1L4Q8WU68 220 aaKnown RBP27.15■■□□□ 1.94
RAB40C-204ENST00000538492 RUBCNQ92622 972 aa27.15■■□□□ 1.94
RAB40C-204ENST00000538492 UBE4BO95155 1302 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 GOLGA6BA6NDN3 693 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 CAPN2P17655 700 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 RPS6KA1Q15418 735 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 MTMR14Q8NCE2 650 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 CLEC4DQ8WXI8 215 aa27.14■■□□□ 1.94
RAB40C-204ENST00000538492 TAF4BQ92750 862 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms