RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 SPTLC2O15270 562 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 TXKP42681 527 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 CCL23P55773 120 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 STK38Q15208 465 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 EPHA7Q15375 998 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-206ENST00000537925 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
SNHG1-206ENST00000537925 TUBE1Q9UJT0 475 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 PYCARDQ9ULZ3 195 aa12.85□□□□□ -0.35
SNHG1-206ENST00000537925 LAMA2P24043 3122 aaKnown RBP12.84□□□□□ -0.35
SNHG1-206ENST00000537925 MICAL3Q7RTP6 2002 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 GBF1Q92538 1859 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 PTPRSQ13332 1948 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 PPP6R2O75170 966 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 STBD1O95210 358 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 OR52Z1P0C646 297 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 CKBP12277 381 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 CSF2RAP15509 400 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 CMA1P23946 247 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 EPHB4P54760 987 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNHG1-206ENST00000537925 ZNF484Q5JVG2 852 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 RPAINQ86UA6 219 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
SNHG1-206ENST00000537925 SPC24Q8NBT2 197 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 VWCEQ96DN2 955 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 SCLYQ96I15 445 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 FAM167AQ96KS9 214 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNHG1-206ENST00000537925 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
SNHG1-206ENST00000537925 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
SNHG1-206ENST00000537925 A0A1W2PPC1 479 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 CAND2O75155 1236 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 OATP04181 439 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 P4HBP07237 508 aaKnown RBP12.83□□□□□ -0.36
SNHG1-206ENST00000537925 SELPP16109 830 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 QARSP47897 775 aaKnown RBP12.83□□□□□ -0.36
SNHG1-206ENST00000537925 PSMC5P62195 406 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 IGBP1P78318 339 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 PRKCEQ02156 737 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
SNHG1-206ENST00000537925 PTGDRQ13258 359 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 SLC39A14Q15043 492 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
SNHG1-206ENST00000537925 TAF2Q6P1X5 1199 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
SNHG1-206ENST00000537925 LRRC8DQ7L1W4 858 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 C16orf59Q7L2K0 433 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 CCDC186Q7Z3E2 898 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 DHX40Q8IX18 779 aaKnown RBP12.83□□□□□ -0.36
SNHG1-206ENST00000537925 BANK1Q8NDB2 785 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 UBE2Q2Q8WVN8 375 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 PCDHA2Q9Y5H9 948 aa12.83□□□□□ -0.36
SNHG1-206ENST00000537925 BECN2A8MW95 431 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 LAD1O00515 517 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.365e-7■■□□□ 13.2
SNHG1-206ENST00000537925 SLITRK3O94933 977 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 RFC2P35250 354 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 THPOP40225 353 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 XKR3Q5GH77 459 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 ZNF618Q5T7W0 954 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 MTHFD1LQ6UB35 978 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 RUFY4Q6ZNE9 571 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 ZBTB10Q96DT7 871 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 HSD17B14Q9BPX1 270 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 NIFKQ9BYG3 293 aaKnown RBP12.82□□□□□ -0.36
SNHG1-206ENST00000537925 IL23AQ9NPF7 189 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 RGL1Q9NZL6 768 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 WRAP73Q9P2S5 460 aaPredicted RBP12.82□□□□□ -0.36
SNHG1-206ENST00000537925 IMPACTQ9P2X3 320 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 CEP131Q9UPN4 1083 aa12.82□□□□□ -0.36
SNHG1-206ENST00000537925 MORC2Q9Y6X9 1032 aaPredicted RBP12.82□□□□□ -0.36
SNHG1-206ENST00000537925 SMIM35A0A1B0GVV1 85 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 POTEMA6NI47 508 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 PARNO95453 639 aaKnown RBP12.81□□□□□ -0.36
SNHG1-206ENST00000537925 RPLP2P05387 115 aaKnown RBP12.81□□□□□ -0.36
SNHG1-206ENST00000537925 KLRC1P26715 233 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 PRPHP41219 470 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 TECP42680 631 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNHG1-206ENST00000537925 GSDMDP57764 484 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 GPNMBQ14956 572 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 TARBP2Q15633 366 aaKnown RBP12.81□□□□□ -0.36
SNHG1-206ENST00000537925 FAM26DQ5JW98 314 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 TMEM240Q5SV17 173 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 AXDND1Q5T1B0 1012 aaPredicted RBP12.81□□□□□ -0.36
SNHG1-206ENST00000537925 ANO5Q75V66 913 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 TRMT1LQ7Z2T5 733 aaKnown RBP12.81□□□□□ -0.36
SNHG1-206ENST00000537925 C4orf19Q8IY42 314 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 DRC7Q8IY82 874 aa12.81□□□□□ -0.36
SNHG1-206ENST00000537925 RPUSD2Q8IZ73 545 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms