RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 PCDHA4Q9UN74 947 aa15.73■□□□□ 0.11
SYNE1-235ENST00000537033 ST3GAL5Q9UNP4 418 aa15.73■□□□□ 0.11
SYNE1-235ENST00000537033 MSH4O15457 936 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 OATP04181 439 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 PRKCEQ02156 737 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 HYAL1Q12794 435 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 TOB2Q14106 344 aaPredicted RBP15.72■□□□□ 0.11
SYNE1-235ENST00000537033 FAM177A1Q8N128 213 aaPredicted RBP15.72■□□□□ 0.11
SYNE1-235ENST00000537033 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 TBCKQ8TEA7 893 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 SLC5A5Q92911 643 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 ZNF274Q96GC6 653 aaPredicted RBP15.72■□□□□ 0.11
SYNE1-235ENST00000537033 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 IGFLR1Q9H665 355 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 CDHR5Q9HBB8 845 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 RGS18Q9NS28 235 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 PRKAG3Q9UGI9 489 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 PCDHB12Q9Y5F1 795 aa15.72■□□□□ 0.11
SYNE1-235ENST00000537033 PLXNA4Q9HCM2 1894 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 TBKBP1A7MCY6 615 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 ITGB1P05556 798 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 GATMP50440 423 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 CLCN3P51790 818 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 GALNT17Q6IS24 598 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 EFCAB12Q6NXP0 572 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 FAM228AQ86W67 206 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 RDM1Q8NG50 284 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 UPF3BQ9BZI7 483 aaKnown RBP15.71■□□□□ 0.11
SYNE1-235ENST00000537033 TM6SF1Q9BZW5 370 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 CD320Q9NPF0 282 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 HCN4Q9Y3Q4 1203 aa15.71■□□□□ 0.11
SYNE1-235ENST00000537033 MYO7AQ13402 2215 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 C9IYK1 514 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 HOXA2O43364 376 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 MGEA5O60502 916 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 GPR32O75388 356 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 CDKL5O76039 1030 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 ZSCAN20P17040 1043 aaPredicted RBP15.7■□□□□ 0.1
SYNE1-235ENST00000537033 NDUFV1P49821 464 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 NLRP11P59045 1033 aaKnown RBP15.7■□□□□ 0.1
SYNE1-235ENST00000537033 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 STK3Q13188 491 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 CTC1Q2NKJ3 1217 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 Q4G0T1 1027 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 MIER3Q7Z3K6 550 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 BLIDQ8IZY5 108 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 LRRC71Q8N4P6 559 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 DAGLBQ8NCG7 672 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 SPPL3Q8TCT6 385 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 POP1Q99575 1024 aaKnown RBP15.7■□□□□ 0.1
SYNE1-235ENST00000537033 LRFN3Q9BTN0 628 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 UNC45AQ9H3U1 944 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 PDRG1Q9NUG6 133 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 TMEM161AQ9NX61 479 aa15.7■□□□□ 0.1
SYNE1-235ENST00000537033 PI4K2BG5E9Z4 385 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 ALADP13716 330 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 LTBRP36941 435 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 UBE3AQ05086 875 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 CLUL1Q15846 466 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 KRT25Q7Z3Z0 450 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 POF1BQ8WVV4 589 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 ELAC1Q9H777 363 aaKnown RBP15.69■□□□□ 0.1
SYNE1-235ENST00000537033 SEPT9Q9UHD8 586 aaPredicted RBP15.69■□□□□ 0.1
SYNE1-235ENST00000537033 RAPGEFL1Q9UHV5 662 aa15.69■□□□□ 0.1
SYNE1-235ENST00000537033 ZNF862O60290 1169 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 GPR37L1O60883 481 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 TDP2O95551 362 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 XBP1P17861 261 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 LAG3P18627 525 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 EIF4BP23588 611 aaKnown RBP15.68■□□□□ 0.1
SYNE1-235ENST00000537033 SMAD4Q13485 552 aaKnown RBP15.68■□□□□ 0.1
SYNE1-235ENST00000537033 CAMK1Q14012 370 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 NONOQ15233 471 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYNE1-235ENST00000537033 UGCGQ16739 394 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 FAM102BQ5T8I3 360 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 MOXD1Q6UVY6 613 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 ADHFE1Q8IWW8 467 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 THNSL1Q8IYQ7 743 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 ABI1Q8IZP0 508 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 NLRP7Q8WX94 980 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 KHSRPQ92945 711 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYNE1-235ENST00000537033 LARP6Q9BRS8 491 aaKnown RBP15.68■□□□□ 0.1
SYNE1-235ENST00000537033 CD207Q9UJ71 328 aa15.68■□□□□ 0.1
SYNE1-235ENST00000537033 CYP3A7-CYP3A51PA0A087WV96 503 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 CCDC194A0A1B0GVG4 234 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 TBX10O75333 385 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 PSMD10O75832 226 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 FGFR1P11362 822 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 CYP3A7P24462 503 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 DNAJB1P25685 340 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
SYNE1-235ENST00000537033 DNM2P50570 870 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 ZP2Q05996 745 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 DLX2Q07687 328 aaPredicted RBP15.67■□□□□ 0.1
SYNE1-235ENST00000537033 DSC3Q14574 896 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms