RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CATSPER2Q96P56 530 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 TMEM237Q96Q45 408 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ZWILCHQ9H900 591 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 JAG2Q9Y219 1238 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 GFPT2O94808 682 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ECEL1O95672 775 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 GNA14O95837 355 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 PMS2P54278 862 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ERVK-24P63145 666 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ITGA9Q13797 1035 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 DPY19L2Q6NUT2 758 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 APOA5Q6Q788 366 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 SH3RF1Q7Z6J0 888 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 PARD3BQ8TEW8 1205 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 DDX47Q9H0S4 455 aaKnown RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 BIN2Q9UBW5 565 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 FAM187AA6NFU0 413 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC53A6NM62 1247 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 BTNL10A8MVZ5 291 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 IRF6O14896 467 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 SRGNP10124 158 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 OCRLQ01968 901 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TMEM259Q4ZIN3 620 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ALDH16A1Q8IZ83 802 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ZCRB1Q8TBF4 217 aaKnown RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 DNAJC9Q8WXX5 260 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 OSBPL7Q9BZF2 842 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 RNPEPL1Q9HAU8 725 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ALKQ9UM73 1620 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 CASZ1Q86V15 1759 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TTC26A0AVF1 554 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF233A6NK53 670 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 IGF2BP3O00425 579 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 MAPK13O15264 365 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ESRRAP11474 423 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ANKRD35Q8N283 1001 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 CABLES1Q8TDN4 633 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TGS1Q96RS0 853 aaKnown RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TIPINQ9BVW5 301 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 RNF26Q9BY78 433 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ARPP21Q9UBL0 812 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TFR2Q9UP52 801 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 SPAG7O75391 227 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 IFNB1P01574 187 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 PCP11498 1178 aaKnown RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 GRAMD1BQ3KR37 738 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 KRT25Q7Z3Z0 450 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 MAP7D3Q8IWC1 876 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 MAP3K14Q99558 947 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 DLGAP2Q9P1A6 1054 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ZBTB21Q9ULJ3 1066 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 PCDHB13Q9Y5F0 798 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 COMMD10Q9Y6G5 202 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 USP6P35125 1406 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 CDC25CP30307 473 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 VHLP40337 213 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 STAT1P42224 750 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 SERPINB4P48594 390 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 RPL26P61254 145 aaKnown RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 CC2D2BQ6DHV5 1058 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 MB21D2Q8IYB1 491 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ANKRD2Q9GZV1 360 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TMEM60Q9H2L4 133 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TFCP2L1Q9NZI6 479 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 C3P01024 1663 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 ADAM9Q13443 819 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 LIN9Q5TKA1 542 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 USP37Q86T82 979 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 EHMT1Q9H9B1 1298 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 RXFP1Q9HBX9 757 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 EHD2Q9NZN4 543 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 TMOD2Q9NZR1 351 aa5.8□□□□□ -1.48
PTPRD-213ENST00000537002 DMGDHQ9UI17 866 aaKnown RBP5.8□□□□□ -1.48
PTPRD-213ENST00000537002 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ARL1P40616 181 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DRG2P55039 364 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 CACNB1Q02641 598 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PICALMQ13492 652 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 CALCRLQ16602 461 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 GRAMD4Q6IC98 578 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 TMTC3Q6ZXV5 915 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 SEPT12Q8IYM1 358 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 BLIDQ8IZY5 108 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF513Q8N8E2 541 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 ACTRT1Q8TDG2 376 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 HIC2Q96JB3 615 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PLEKHG4BQ96PX9 1271 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 THRAP3Q9Y2W1 955 aaKnown RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RGPD1P0DJD0 1748 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 CCDC162PA2VCL2 907 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DKC1O60832 514 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 DPYDQ12882 1025 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 MESDQ14696 234 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 COBLL1Q53SF7 1204 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RGS9BPQ6ZS82 235 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 PIGWQ7Z7B1 504 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RDH13Q8NBN7 331 aa5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RBBP8NLQ8NC74 664 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-213ENST00000537002 RSPH1Q8WYR4 309 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms