RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 CEP104O60308 925 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 SMIM24O75264 130 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 VIMP08670 466 aaKnown RBP16.94■□□□□ 0.3
CHFR-213ENST00000536843 FCER1AP12319 257 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 CALML3P27482 149 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 PDE6BP35913 854 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 PDE6CP51160 858 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 LBRQ14739 615 aaKnown RBP16.94■□□□□ 0.3
CHFR-213ENST00000536843 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
CHFR-213ENST00000536843 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
CHFR-213ENST00000536843 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 NOC2LQ9Y3T9 749 aaKnown RBP16.94■□□□□ 0.3
CHFR-213ENST00000536843 ASB3Q9Y575 518 aa16.94■□□□□ 0.3
CHFR-213ENST00000536843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
CHFR-213ENST00000536843 LRRD1A4D1F6 860 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
CHFR-213ENST00000536843 LDHCP07864 332 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 SGSM1Q2NKQ1 1148 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 GNPTABQ3T906 1256 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 C15orf52Q6ZUT6 534 aaKnown RBP16.93■□□□□ 0.3
CHFR-213ENST00000536843 KIAA0895Q8NCT3 520 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 AP1M1Q9BXS5 423 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
CHFR-213ENST00000536843 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 PCDHA4Q9UN74 947 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 USP15Q9Y4E8 981 aaPredicted RBP16.93■□□□□ 0.3
CHFR-213ENST00000536843 ROBO3Q96MS0 1386 aa16.93■□□□□ 0.3
CHFR-213ENST00000536843 UFL1O94874 794 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 CNGA1P29973 690 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 ASIC1P78348 528 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 ANO7Q6IWH7 933 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 FMO2Q99518 471 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 PRMT1Q99873 361 aaKnown RBP16.92■□□□□ 0.3
CHFR-213ENST00000536843 EPB41L4BQ9H329 900 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 CD209Q9NNX6 404 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 CCDC169A6NNP5 214 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 E7ENQ6 273 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 KRIT1O00522 736 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 GNAZP19086 355 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 BTDP43251 543 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 RASGEF1CQ8N431 466 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 TMEM47Q9BQJ4 181 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
CHFR-213ENST00000536843 ATP8A1Q9Y2Q0 1164 aa16.92■□□□□ 0.3
CHFR-213ENST00000536843 UTP11Q9Y3A2 253 aaKnown RBP16.92■□□□□ 0.3
CHFR-213ENST00000536843 SPDYE3A6NKU9 549 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 CYTH3O43739 400 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 AGTP01019 485 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 RASA1P20936 1047 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 GNAQP50148 359 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 LMNB2Q03252 620 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 KCNMA1Q12791 1236 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 PLS1Q14651 629 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 LRRC57Q8N9N7 239 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 PLIN2Q99541 437 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 PACSIN1Q9BY11 444 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 STX8Q9UNK0 236 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 FLT1P17948 1338 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 A0A087X0T9 212 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 O00370 1275 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 TTI1O43156 1089 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 FAM228BP0C875 321 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 PLCG1P19174 1290 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 SF3A3Q12874 501 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■■■■■ 27.2
CHFR-213ENST00000536843 LAMB3Q13751 1172 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 FAM83BQ5T0W9 1011 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
CHFR-213ENST00000536843 LMNTD2Q8IXW0 634 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 KIF2BQ8N4N8 673 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 ATP8B4Q8TF62 1192 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 PLCD4Q9BRC7 762 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 RGL1Q9NZL6 768 aa16.91■□□□□ 0.3
CHFR-213ENST00000536843 SUN1O94901 812 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 SHBGP04278 402 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 GOLGA8HP0CJ92 632 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 SKIV2L2P42285 1042 aaKnown RBP16.9■□□□□ 0.3
CHFR-213ENST00000536843 MXRA7P84157 204 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 CROCCP2Q86T23 111 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
CHFR-213ENST00000536843 TEKT4Q8WW24 435 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 PABPC3Q9H361 631 aaKnown RBP16.9■□□□□ 0.3
CHFR-213ENST00000536843 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 M0R2N6 131 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 NOL4O94818 638 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 SERPINB2P05120 415 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 GYS1P13807 737 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 ATP2B4P23634 1241 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 NT5C2P49902 561 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 POU5F1Q01860 360 aaKnown RBP16.9■□□□□ 0.3
CHFR-213ENST00000536843 C10orf76Q5T2E6 689 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 HEATR3Q7Z4Q2 680 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 METTL13Q8N6R0 699 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms