RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CPLX3Q8WVH0 158 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 RABGGTAQ92696 567 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 SH2D3AQ9BRG2 576 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 POLR3CQ9BUI4 534 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 NT5C3AQ9H0P0 336 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 VPS16Q9H269 839 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TAB2Q9NYJ8 693 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 MYO1AQ9UBC5 1043 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 FHOD1Q9Y613 1164 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 DNAH12Q6ZR08 3092 aa14.29□□□□□ -0.12
CDK5RAP3-202ENST00000536708 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 LGALS16A8MUM7 142 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 MAFGO15525 162 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ADCY6O43306 1168 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ACTR2P61160 394 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TUBB4BP68371 445 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 CCDC60Q8IWA6 550 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 USP6NLQ92738 828 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 BHMT2Q9H2M3 363 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ST7Q9NRC1 585 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 RNF186Q9NXI6 227 aa14.28□□□□□ -0.12
CDK5RAP3-202ENST00000536708 A0A0U1RQG5 324 aaPredicted RBP14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 PSMA7O14818 248 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 PLA2G4BP0C869 781 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ADCYAP1R1P41586 468 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 PSMC4P43686 418 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ZNF746Q6NUN9 644 aaPredicted RBP14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TTI2Q6NXR4 508 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TAPT1Q6NXT6 567 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 HPS3Q969F9 1004 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 LENG1Q96BZ8 264 aaPredicted RBP14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TINF2Q9BSI4 451 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TUFT1Q9NNX1 390 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 GJD2Q9UKL4 321 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 GABRQQ9UN88 632 aa14.27□□□□□ -0.12
CDK5RAP3-202ENST00000536708 SYNGAP1Q96PV0 1343 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 B4DLN1 442 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 RNF225M0QZC1 329 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CYP2C19P33261 490 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 JAK3P52333 1124 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 SLC12A3P55017 1021 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 ASIC1P78348 528 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 PRAMEF19Q5SWL8 479 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CCDC62Q6P9F0 684 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 TMCO3Q6UWJ1 677 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 MAMDC4Q6UXC1 1216 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 SV2BQ7L1I2 683 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 RUSC1Q9BVN2 902 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 POLD4Q9HCU8 107 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CDC23Q9UJX2 597 aa14.27□□□□□ -0.13
CDK5RAP3-202ENST00000536708 ZNF862O60290 1169 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 TXNP10599 105 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 KRT9P35527 623 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 UBXN1Q04323 297 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 HSDL1Q3SXM5 330 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 TRIM50Q86XT4 487 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 DDX12PQ92771 950 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 GOLGA1Q92805 767 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CCDC47Q96A33 483 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 APBA2Q99767 749 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 GABBR1Q9UBS5 961 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 TSKSQ9UJT2 592 aa14.26□□□□□ -0.13
CDK5RAP3-202ENST00000536708 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 PNMA6AP0CW24 399 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CYP11B2P19099 503 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CCNE1P24864 410 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 SFNP31947 248 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 DNM2P50570 870 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 PMS1P54277 932 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 AMPD3Q01432 767 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 PRKCZQ05513 592 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 ARSHQ5FYA8 562 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 ZNF662Q6ZS27 426 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CEP112Q8N8E3 955 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 SCFD2Q8WU76 684 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 DNAJC7Q99615 494 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 DUSP9Q99956 384 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 IRX2Q9BZI1 471 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 VTA1Q9NP79 307 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 LZTFL1Q9NQ48 299 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 CAPN11Q9UMQ6 739 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 DIS3Q9Y2L1 958 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 PCDHA10Q9Y5I2 948 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 LOC102724159A0A0B4J2E5 919 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 BICDL2A1A5D9 508 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 TRIM49BA6NDI0 452 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 HOXC6P09630 235 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 MAP2K2P36507 400 aa14.25□□□□□ -0.13
CDK5RAP3-202ENST00000536708 RGS2P41220 211 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms